Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02504 ATGGATTCTGAGTTCTGGACCTCTCGTCTCGCCGCCGCGAAACGCCACTATACCTTTCAGCATAACCATCCAACTTCTCATTTAGGTATAGATGATTTTGATGTTGAAGAAGAGGTGAGACCAGATTTCCCTTGTCCCTATTGTTACGAAGAGTTTGATATAGGGTCTTTGTGTTCTCATCTTGAAGATGAACATTCATGTGAATCGAGAGTTACGATTTGTCCTGTATGTTCGGTTAAAGTTGCACGCGACATGTTGAGCCACATAACTCTGCAACATGGGCACCTATTTAAGATACAGAGAAGGCGCAGGTTAAGAAGAGTTGCTATTCCGAATAGTCAGTCATTGTCTCTCTTAGGTCGAGATCTCCGGGAAGCTCATTTACAGGTGCTTCTTAATGGTGGAGGTGGATACCGGTCGCATAGTAACTCAGTATCCAATGCGTCTGCTGATCCGTTCCTGTCCTCTTTTATTTTGAATTACCCTCAATGTGAAGCTGAAGAAATCTCTAAATCTGTTGTAACAAGTGCTGAAGATTCTTCTTCTACAAAGAACACAGCATCGCCTGTACAACATATTTGGAAATCAAGTTTTGATCAATCGTTGAGTATCGAAGAGCGGGAGAAAAGGATTAGGCAAGCTGCCGGGCGGTCTAGTTTTGTGCAGGATTTGTTTCTGTCAACCTTGTTAGGCGACTAA 699 0.4306 MDSEFWTSRLAAAKRHYTFQHNHPTSHLGIDDFDVEEEVRPDFPCPYCYEEFDIGSLCSHLEDEHSCESRVTICPVCSVKVARDMLSHITLQHGHLFKIQRRRRLRRVAIPNSQSLSLLGRDLREAHLQVLLNGGGGYRSHSNSVSNASADPFLSSFILNYPQCEAEEISKSVVTSAEDSSSTKNTASPVQHIWKSSFDQSLSIEEREKRIRQAAGRSSFVQDLFLSTLLGD 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02504 232 Pfam Drought induced 19 protein (Di19), zinc-binding 42 94 IPR008598 -
Vifa6g02504 232 Pfam Stress-induced protein Di19, C-terminal 116 229 IPR027935 -
Vifa6g02504 232 PANTHER PROTEIN DEHYDRATION-INDUCED 19 29 230 IPR033347 -
Vifa6g02504 232 SUPERFAMILY TRAF domain-like 43 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02504 Vifa-Chr6 863134272 863137312 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vifa6g02504 Di19_C 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02504 - - gmx:100792230 380.178