Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02450 ATGTTTTTCTTCACTTTCTTTCCACTCTTACTATCTCTTTTCTTCATAATCAAATATTTGTATTATTCCAACAGTTCTTCTGCCACCATAAAAAACTCACCACCATCACCTCCAAGATTTCCACTCCTTGTACTTGTGGTTTCTTCTGCTGATGCAGCAAGAAAAATAATGAAAACTCACGATTTGGTTTTCTCCGATAGGCCACAAAGTAAAACCTTTGACATCCTTTTATACGGTTCCAAGGATGTGTCAAGTTGTGCATATGGTGAGTATTGGAGGCAAATAAGGAGTCTCTGTGTGTTGCACGTTCTGAGTAATAAAAGGGTTCAATCTTATCGTCGTGTTAGACAGGAAGAAACTTCAAGAATGATGGAATATTCTTCTTCTGCATCGTCGCCGTTGAACTTATCTGAGTTGTGTTCTATGGTTACTAATGATATAGTATGTAGGGTGGCTCTAGGAAGGAGATACCGTGAAGGAAGAGGGAAGAAATTTCAGCAAGTGTTGTCGGAGTTTGGGGAATTATTGGGTACTATATCTATTGGAGACTATATACCTTGGCTTTATTGGTTGGGAAAAGTAAATGGTTTTTATAGAAAGGCAGAAAGAGTAGCCAAACATTTGGATGAGTTTATAGAAGAAGTAATTGAGGATCACATTAGTCGTAGATCTGATGAAGATGTTGGTGTTGATGATAATGATTTTGTGGATGTTTTGCTTTCAGTTCAAAAGACTAATGCTACTGGCTTCCTAATTGATAGAACTGCAATAAAAGCTTTGATACTGGACATGTTTGCTGCAGGTACTGACACTACATACACCGTTCTAGAATGGGCAATGACAGAACTGTTAAGACACCAAACCGTGATGCATAAATTGCAAGATGAGGCTGTGATCAAAGAAACTCTTCGCCTGCATGTCCCGATTCCGTTATTAGTCCCTCGGAGATGTATGGAAGATATCAAATTAGATGGCTATGACATTGCAGTTGGCACACAGGTAATAGTGAATGCTTGGGCGATTGCAAGAGACCCTTCAAGTTGGGAAGAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATAGATTTTAAAGGATTGGATTTTGAACTTATACCATTTGGAGCTGGAAGGAGGGGTTGTCCTGGAATGTCATTTGCCATTGCTGTGAATGAGTTGGTGCTAGCAAACCTTGTTTGCCAATTTGATTGGAAATTGCCTGATGGAGTAGCAGGGAAGGATTTGGACATGTCTGAGAGTGTGGGCATTGCCTGTCATAGGAAATACCCTCTCCTTGCTGTGGCTACCAAACATGAGAAAAAATGA 1332 0.3956 MFFFTFFPLLLSLFFIIKYLYYSNSSSATIKNSPPSPPRFPLLVLVVSSADAARKIMKTHDLVFSDRPQSKTFDILLYGSKDVSSCAYGEYWRQIRSLCVLHVLSNKRVQSYRRVRQEETSRMMEYSSSASSPLNLSELCSMVTNDIVCRVALGRRYREGRGKKFQQVLSEFGELLGTISIGDYIPWLYWLGKVNGFYRKAERVAKHLDEFIEEVIEDHISRRSDEDVGVDDNDFVDVLLSVQKTNATGFLIDRTAIKALILDMFAAGTDTTYTVLEWAMTELLRHQTVMHKLQDEAVIKETLRLHVPIPLLVPRRCMEDIKLDGYDIAVGTQVIVNAWAIARDPSSWEEPLEFKPERFMNSSIDFKGLDFELIPFGAGRRGCPGMSFAIAVNELVLANLVCQFDWKLPDGVAGKDLDMSESVGIACHRKYPLLAVATKHEKK 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02450 443 PANTHER CYTOCHROME P450 71B11-RELATED 44 296 - -
Vifa6g02450 443 Gene3D Cytochrome P450 21 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 PRINTS E-class P450 group I signature 143 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 PRINTS E-class P450 group I signature 383 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 PRINTS E-class P450 group I signature 256 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 PRINTS E-class P450 group I signature 296 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 PRINTS E-class P450 group I signature 52 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 PRINTS E-class P450 group I signature 337 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 PRINTS E-class P450 group I signature 373 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 CDD CYP71-like 44 433 - -
Vifa6g02450 443 SUPERFAMILY Cytochrome P450 39 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 Pfam Cytochrome P450 296 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 Pfam Cytochrome P450 44 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 376 385 IPR017972 GO:0005506|GO:0016705
Vifa6g02450 443 PRINTS P450 superfamily signature 297 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 PRINTS P450 superfamily signature 374 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02450 443 PRINTS P450 superfamily signature 267 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02450 Vifa-Chr6 850934129 850935722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02450 9 440 Cytochrome P450 AT3G48280 43.878 4.12e-143 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02450 - - gmx:100819183 561.607