Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02449 ATGTTCACCTTTCTCCAAAGTTTTCTTTCACATGCAAACTTCTATTCGCCATTCTCTATGTTTTTCTTCACTATCTTTCCGTTCTTACTATCTCTTTTCTTCATAATCAAATATTTGTATTATTCCAACAATTCTTCTGCCACCGCAAAGAACTTACCACCATCACCTCCAAGATTTCCACTCCTTGGCCGCATGGTAAAATCTTTGATATCCTTTATTACGGTTCCAAGGATGTGGGTGGTTATAGGAAAGAGATGCCGTGAAGGAAGAGGGAAGAAATTGCGGCAAGTGTTGTCGGAGTTTATGGAATTGTTGGGAACTATATGCATAGGAGACTATATACCTTGGCTTGATTGGTTGGGAAAAGTAAATGGTGTTTATAGAAATACAGAAAGAGTAGCCAAATACTTGGATGAGTTTATAGAAGAAGTAATTGAGGATCACATTAGTCGTAGATCTGATGAAGATGTTGGTGTTGATGGTAATGATTTTGTGGATGTTTTGCTTTCAGTTCAAAAGACTAATGCTATTGGCTTCCCAGTTGATAGAACTACAATAAAAGCTTTGATACTGGACATGCTTTTTGATGGTAGTGACACTACTTACACAGTACTAGAATGGGCGATGACAGAACTGTTAAGACACCAAACTGTGATGCATAAATTGCAAGATGAGGTGAGAACTGTGGTTGGTGACAAAACTCGTGTAGCTGAAGAAGATTTGGTTAACATGAACTTCTTGAAGGCAGTGATCAAAGAAACACTTCGTCTCCATTTATCAGTTCCGTTATTAGTCTCTCGGAGATGTATGGAAGATATCAAATTAGATGGCTATGACATTGCAGTTGGCACACAGGTAATAGTGAATGCTTGGGCGATTGCAAGAGACCCTTCAAGTTGGGAAGAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATAGATTTTAAAGGATTGGATTTTGAACTTATACCATTTGGAGCTGGAAGGAGGGGTTGTCCTGGAATGTCATTTGCTATTGCTTTGAATGAGTTGGTGCTAGCAAACCTTGTTTGCCAATTTGATTGGAAATTGCCTGATGGAGTAGCCGGGAAGGATTTGGACATGTCTGAGACTGTGGGCATTACCTGTCATAGGAAATACCCTCTCCTTGCTGTGGCTACCAAACATGAGAAAAAATGA 1188 0.3914 MFTFLQSFLSHANFYSPFSMFFFTIFPFLLSLFFIIKYLYYSNNSSATAKNLPPSPPRFPLLGRMVKSLISFITVPRMWVVIGKRCREGRGKKLRQVLSEFMELLGTICIGDYIPWLDWLGKVNGVYRNTERVAKYLDEFIEEVIEDHISRRSDEDVGVDGNDFVDVLLSVQKTNAIGFPVDRTTIKALILDMLFDGSDTTYTVLEWAMTELLRHQTVMHKLQDEVRTVVGDKTRVAEEDLVNMNFLKAVIKETLRLHLSVPLLVSRRCMEDIKLDGYDIAVGTQVIVNAWAIARDPSSWEEPLEFKPERFMNSSIDFKGLDFELIPFGAGRRGCPGMSFAIALNELVLANLVCQFDWKLPDGVAGKDLDMSETVGITCHRKYPLLAVATKHEKK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02449 395 PRINTS P450 superfamily signature 326 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02449 395 PRINTS P450 superfamily signature 196 213 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02449 395 PRINTS P450 superfamily signature 249 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02449 395 FunFam Predicted protein 194 387 - -
Vifa6g02449 395 SUPERFAMILY Cytochrome P450 79 390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02449 395 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 328 337 IPR017972 GO:0005506|GO:0016705
Vifa6g02449 395 PANTHER CYTOCHROME P450 71B11-RELATED 67 391 - -
Vifa6g02449 395 PRINTS E-class P450 group I signature 248 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02449 395 PRINTS E-class P450 group I signature 185 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02449 395 PRINTS E-class P450 group I signature 335 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02449 395 PRINTS E-class P450 group I signature 205 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02449 395 PRINTS E-class P450 group I signature 325 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02449 395 PRINTS E-class P450 group I signature 289 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02449 395 Gene3D Cytochrome P450 78 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02449 395 Pfam Cytochrome P450 82 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02449 Vifa-Chr6 850601670 850603318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02449 86 392 Cytochrome P450 AT3G48280 46.497 2.04e-100 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02449 - - tpra:123915719 487.648