Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02437 ATGGCTTATAGACGTTGCCTCTTGCAAAGACGAAACCTAATAGACCGAAACTTCCACCCCTCTTTCACCTATGTTATCCATACCGGCGAAGGTAAACGTGACCAGTCAGACGAAATACCTTGTTCATCAGGAATCACTAGTTTTGTTCAATCAAGATCCTTTCGGAGTTCTCTTCATCGATCAACGGGTTTTTTCTCATCCTCTCAACATCGAATCTTTTCTCCTTTCGCTGGATATACTTTCTGTCGAAATATGTCGACGATCGATCACGATTCGGATAAGATTACTGCAATCACTGATGTAGCTGATGTTCTTGTTGGTACCACCATGGACGCTGTTGTTTCTCAGGCTCCCGTTGTTAGTGAAGTTGCCATTGCTGCTGCTGATTCTTATTTGCCCGTACAAGCATTGCAGTATGTTATAGATGCAGTGCATTCCTTCACCGGGCTACACTGGTGGGCATCCATAGTTCTAACAACTCTCTTGATTCGAAGTGCAACTATTCCACTCTTAATAAATCAACTCAAGGCCACTTCTAAGCTTACTCTTATGAGGCCTCGCTTAGAAGAGATAAAGGAAAAAATTGATAGACAGACAATGGATCCCGAGGCTGTTGCTGAAGGTCAGAAGGAGATGTCAAAGCTATTCAAAGAATATGGTGTGACTCCATTTACGCCAATGAAGGGACTCTTTATTCAAGGTCCTGTCTTCATTAGTTTTTTTCTTGCGATAACAAACATGGCTGAAAAAATGCCATCATTCAAACATGGCGGAGCTTTCTGGTTCACTGATCTCACAACTCCAGACGCCTTATACATTTTTCCAGTTATAACTGCATTGTCATTTTTACTAGTAGTAGAGTGTAATATGCAAGAAGGACTGGAAGGAAATCCTATGGCTGCCACCATGAAAAATTTCTCAAGGGTTCTTGCTCTTCTTTCCGTTCCTTTCACCATGAGTTTTCCAAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCTCTTTCATATGGAATGATGCTTAGAGTCCCCGGTGTTAAGAAAACTTTAGGTATTCCTGATTTGCCTCCAGCAGAACCCATCAGCTCTCCAAAATCTCCCTTCTCAATATTTCCAGCACTAAAACAAGCGGCGTCAGTGGCAAATGGACAAAGCTCATTTCCAGTTGATTCATCCAAACAGCCAAATAAAAATATTTCTTCTTCTTCTGCTGTAATCAGTCAAAGGCTTAGAAGCTTAGAGAAAAAAGTAAAAGGAAGAAAGAAAAGCAAGAAGTGA 1284 0.4081 MAYRRCLLQRRNLIDRNFHPSFTYVIHTGEGKRDQSDEIPCSSGITSFVQSRSFRSSLHRSTGFFSSSQHRIFSPFAGYTFCRNMSTIDHDSDKITAITDVADVLVGTTMDAVVSQAPVVSEVAIAAADSYLPVQALQYVIDAVHSFTGLHWWASIVLTTLLIRSATIPLLINQLKATSKLTLMRPRLEEIKEKIDRQTMDPEAVAEGQKEMSKLFKEYGVTPFTPMKGLFIQGPVFISFFLAITNMAEKMPSFKHGGAFWFTDLTTPDALYIFPVITALSFLLVVECNMQEGLEGNPMAATMKNFSRVLALLSVPFTMSFPKAIFCYWITSNLFSLSYGMMLRVPGVKKTLGIPDLPPAEPISSPKSPFSIFPALKQAASVANGQSSFPVDSSKQPNKNISSSSAVISQRLRSLEKKVKGRKKSKK 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02437 427 NCBIfam membrane protein insertase YidC 152 338 IPR028055 -
Vifa6g02437 427 CDD 5TM_Oxa1-like 149 346 - -
Vifa6g02437 427 PANTHER OXA1 111 418 IPR001708 GO:0016020|GO:0032977
Vifa6g02437 427 Pfam 60Kd inner membrane protein 152 338 IPR028055 -
Vifa6g02437 427 MobiDBLite consensus disorder prediction 386 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02437 Vifa-Chr6 847986873 847992408 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02437 65 350 Chloroplast and Mitochondria Gene Families AT2G28800 24.756 3.19e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02437 K03217 - gmx:100817052 600.512