Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02432 ATGAATCTGTTTGAAAATCATTTCCATGTTGCGGAGCTCTTCGGGAGAGAACATACAGAGTCGACTCAGCTGTTTCTGGAAAACTCGGTTTGTTTCAAGGTGAGTTACATGGCCGCAAATCTCATGATTTTGGAATCTGCATTTGAGGAAAACGGAAGAGGCTTCTGTGTGGTGGATTTCGAAATTGGACAGGGGAAACAGTTCGTGAATCTCCCGCACGCGCTTAAAGCGCGTGATATTGCACTGCCTCCAAGTTTTACGCTTAAGTTAATCACTGTGGCGGAGAATGGTCGTGATGAGATGGTTATAGCTGTCGGAGAGATGCTGGTTCATCAGGCGGAGAGTTCAATCATCGATCTCTTGTTAATCGATTCTGTAGAAGCCATTTTCGTCGATTAA 399 0.4486 MNLFENHFHVAELFGREHTESTQLFLENSVCFKVSYMAANLMILESAFEENGRGFCVVDFEIGQGKQFVNLPHALKARDIALPPSFTLKLITVAENGRDEMVIAVGEMLVHQAESSIIDLLLIDSVEAIFVD 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02432 132 Pfam GRAS domain family 16 118 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02432 Vifa-Chr6 846819252 846819650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02432 10 109 GRAS Transcription Factor Family AT5G52510 40.708 9.25e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vifa6g02432 GRAS 3.3e-13 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02432 - - vun:114181888 116.316