Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02388 ATGGTTCAAAGAAAGGTCCCAAACAATCTTAGTATCCAAACACAACATGTTAAATTTGACAAATTTCCCACAAACATGAAACTATCTTCTTCATCTTCTCATCAACAAAACCAAGATGATAAAAGTAAACTTTCTAAGAAAATGAAGATATCAAACTCAATCAAACTCTCTCATCTTGAGACTCTTCAACTTCAATCAACACCAATTTCAACAAAAACAACAACAACAAAAGATGGTTCACCAAATTACATGAAGCACACAAGTAGTTCACAATCAAAAAAGGAACTTTTTCATGTAAGTCTTAGAAAAACTCAATCTTGCTCTGTTTCTAAGAATCTTGATACAAAATTTTCTAGTGATTATTCATGTAAAAAACCTAGTTTGAGTTTGGTTAGAACATTAACAAAAACTACTAGTTTTAAGGGTTCTAGAAATTCTCCTAGAAAATCAACAAGGGCTACTTGTTCTTCCACTCTGAAAGACTCAAACTTTCCATCATATCTTGAGCTTAATCATGGTGGAACTGAGTTAGAGGGAAGTTAG 543 0.3204 MVQRKVPNNLSIQTQHVKFDKFPTNMKLSSSSSHQQNQDDKSKLSKKMKISNSIKLSHLETLQLQSTPISTKTTTTKDGSPNYMKHTSSSQSKKELFHVSLRKTQSCSVSKNLDTKFSSDYSCKKPSLSLVRTLTKTTSFKGSRNSPRKSTRATCSSTLKDSNFPSYLELNHGGTELEGS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02388 180 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 179 IPR044681 GO:0005516
Vifa6g02388 180 MobiDBLite consensus disorder prediction 138 157 - -
Vifa6g02388 180 MobiDBLite consensus disorder prediction 1 50 - -
Vifa6g02388 180 MobiDBLite consensus disorder prediction 65 95 - -
Vifa6g02388 180 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02388 Vifa-Chr6 830160921 830161463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02388 79 175 Calmodulin-binding Proteins AT2G38800 48.039 1.58e-15 71.6