Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02364 ATGCAAGCTGCATATAAAATCTATTTCCAAGATGAAGGTGAAAAGTTTACATTTGAGGCTGCATGGAGATTATTGAAAGATGAACCTAAATGGCTCGCAGGTTCATCCGAAGCTTCTACAAAAAGAAGAAAGAATTCGGCTTCAGGAGCATATTCTTCGCCTTCTAATCCATTAACACCAACAAGCAGTGAATACGATCCATCGTCACCTACTTTGTCAGGTCGTCCAATCGATCAAAAGGCATCCAAAAGGAAGGAGAGAGAAAAGCTTGACTATGCACGCATTAAGGGTGAAAAACTTGAGATAGAGAGAAAAAAGGTTGATGCAAAGATTAAGAAGGCTGAGATTGCTGAGGAAAGATTAAAGATGAATGATCTACAAATATTCACAAAAGATACATCAAATATGGATGCAAGACAACTACAAGCTCATGAAATATTGTGCGACGTGATTAGAGAAAAATATGGAATTAATTAG 477 0.3732 MQAAYKIYFQDEGEKFTFEAAWRLLKDEPKWLAGSSEASTKRRKNSASGAYSSPSNPLTPTSSEYDPSSPTLSGRPIDQKASKRKEREKLDYARIKGEKLEIERKKVDAKIKKAEIAEERLKMNDLQIFTKDTSNMDARQLQAHEILCDVIREKYGIN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02364 158 PANTHER - 1 153 - -
Vifa6g02364 158 MobiDBLite consensus disorder prediction 33 88 - -
Vifa6g02364 158 Coils Coil 97 124 - -
Vifa6g02364 158 MobiDBLite consensus disorder prediction 38 76 - -
Vifa6g02364 158 Pfam No apical meristem-associated C-terminal domain 15 140 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02364 Vifa-Chr6 818689111 818689678 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02364 1 87 Glutathione S-transferase Gene Family AT5G41240 34.043 9.34e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02364 - - mtr:11446189 163.696