Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02286 ATGTTGGAGTCTTTACTATCTTGTTCCCAAACCCTCAAGGGATATGACTTGAACAATCAAAAGAGTCCCGGTTATTCTCGCGCCGCTTCGCGAATTTGTAAAAGTTCTAAGCAAGTTCCGTTTCTATGTCATAGTACTGCTGTATCAGAGAAATTCACTAGAAGAACGTCTCTGGATGTTCCTTCATTTTCCGGTTGGAAATTATCCTATCTCGCTAAATATAGGCCACTAAGGAGGGAGCGGTTACAGACTAATGCTACTGCATATGATGTTGCTGGTGCTGTTGAAGTTGTTAATGATTTAGGATTGGATACTCTTACTTTCTTGGGTGTTACGGTCTTTATCGTCCCCTCGTTCAAGTTTATTAAAGCCAGTCCTATACTTGGTTTCTTCCTTGCTGGTGTGGTGCTTAATCAGTTTGGTTTAATTAGGAACCTTGAAGATGTTAAAGTTTTGTCTGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAACTTTCACTAGCACGTTTGAAAGCTCTTGCAAAATATGCCTTTGGAATGGGATTGACTCAGGTTTTACTATCTACTTTAGCATTCACTGCTTTTGAGCTTCCACCAAATGGGGCTGTTGGAACTAAAATTTTGGAATTCCTTTTCCACTCAAGGTCTGATCTGGTGAACATCAGAAGTGTTGACGAAGCTGTAGTGATTGGGGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTTGCAGAGAAAGGCGAGCTTCCTACAAGGCTTGGTTCAGCAACTCTTGGGATACTCCTTTTGCAGGACATAGCCGTTGTCCCTCTTTTGGTTATACTTCCAGTACTTGAGAGCCAGACTATGACTGAGGAAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTGAAGGCATTAGGTGGATTGGGTCTGCTTTCATTTGGAGCCAAGTATATCCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACTAGAAGTTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACTATTGCTGGGACTTCACTACTCACACAGAAATTGGGCTTCAGTGATACGCTTGGAGCATTTTTAGCTGGGGCAATCCTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGTTGCTCGGATTGTTTTTTCTAACTACAGGGACTTCAATTGACATGCAGGTTCTCTTGCGAGAGTGGCCAAATGTACTTGCGCTCTTGGCAGGTTTAATTACGATCAAAACATTGATCATAACTGCGATTGGTCCTCGTGTTGGCCTTACTCTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGAGAGTTCGGATTTGTAGTATTCTCTTTGGCGAATAGACTTGGGGTGCTTCCACTTGAGCTTAACAAGCTGCTCATAATTGTCGTTGTATTGTCAATGGCTCTAACCCCATTTCTGAATGAAGCTGGAAGGAGGGCTGCAAGCTTTATTGAAGACCAATATGATGACGAGAATAAACAGAAAGATACTGATATGGTTAATTTCGATGTTAATGAACCTGTTGTCGTCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTGCTGTCCAACCCAATGGCTTCAGAAGGAGATAGTGATGCAATAGGATGGCCTTATGTGGTATTTGATATTGACGCCAGGGTTGTAAAGGAAGGTAGAAAGCTTGGTTTTCCTATTATCTATGGGGATGGATCAAGTCCAGGTGTTCTTCAATCTGCTGGTATCTCATCTCCAAAAGCTATCATGATTATGCTCACTGAGAAGAAGAAATCAGTTGAAGCTGTTCAGAGGCTACGGTTGGCTTTTCCCGCAGTTCCAATATATGCCAGAGCTCGAGATCTAAAACATCTTTTAGATCTAAAGAAAGCAGGTGCGACAGACGCCACTATGGAAAATGCAGAGACTAGCTTACAACTTGGTTCTAAGTTGCTGAAAGGCCTGGGAATGATGTCCGACGATGTAGCATTTTTGAGCCAGCTTGTTAGAGACTCTATGGAGCTACAAGCTGATGTAGCAGTCAGCCTACCAGATTATCGGGAATCAAAGATTATGGAACCACTTCAGGTGAGAGTTCCTGATATAAAGGAGTCACGCATTCCGGTGGCCACTACTACACCAAAATATGAATTATCAGTACAGAACCAGAAAGATCAAGCTTCGTTGAGTAGAATTCAGAAGGAAGCCGATCCTGAGGAAGAAGATTATGAACTAAATCAAGCTGTTAAATTTGAAGGAAATGGTGCTTCGTTTAGCAAACAAGATATTGAAGAAAACTCAACGGTTGGATCTCAAGATGATTTAGGACAGCAGAATCTTCTGGACCCGTGA 2388 0.4238 MLESLLSCSQTLKGYDLNNQKSPGYSRAASRICKSSKQVPFLCHSTAVSEKFTRRTSLDVPSFSGWKLSYLAKYRPLRRERLQTNATAYDVAGAVEVVNDLGLDTLTFLGVTVFIVPSFKFIKASPILGFFLAGVVLNQFGLIRNLEDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLTQVLLSTLAFTAFELPPNGAVGTKILEFLFHSRSDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRLGSATLGILLLQDIAVVPLLVILPVLESQTMTEESIWPMLAQESLKALGGLGLLSFGAKYILRRVFEVVADTRSSEAFVALCLLTIAGTSLLTQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQVLLREWPNVLALLAGLITIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEDQYDDENKQKDTDMVNFDVNEPVVVLGFGQMGQVLANLLSNPMASEGDSDAIGWPYVVFDIDARVVKEGRKLGFPIIYGDGSSPGVLQSAGISSPKAIMIMLTEKKKSVEAVQRLRLAFPAVPIYARARDLKHLLDLKKAGATDATMENAETSLQLGSKLLKGLGMMSDDVAFLSQLVRDSMELQADVAVSLPDYRESKIMEPLQVRVPDIKESRIPVATTTPKYELSVQNQKDQASLSRIQKEADPEEEDYELNQAVKFEGNGASFSKQDIEENSTVGSQDDLGQQNLLDP 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02286 795 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 526 664 IPR036291 -
Vifa6g02286 795 Gene3D - 100 499 IPR038770 -
Vifa6g02286 795 FunFam K(+) efflux antiporter 3, chloroplastic 100 499 - -
Vifa6g02286 795 Pfam TrkA-N domain 526 648 IPR003148 GO:0006813
Vifa6g02286 795 FunFam Glutathione-regulated potassium-efflux system protein KefB 523 694 - -
Vifa6g02286 795 ProSiteProfiles RCK N-terminal domain profile. 525 657 IPR003148 GO:0006813
Vifa6g02286 795 Gene3D - 523 692 - -
Vifa6g02286 795 Pfam Sodium/hydrogen exchanger family 107 492 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa6g02286 795 MobiDBLite consensus disorder prediction 771 795 - -
Vifa6g02286 795 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 78 750 - -
Vifa6g02286 795 MobiDBLite consensus disorder prediction 767 795 - -
Vifa6g02286 795 MobiDBLite consensus disorder prediction 728 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02286 Vifa-Chr6 799576144 799583881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02286 6 785 Inorganic Solute Cotransporters AT4G04850 66.413 0.0 964
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02286 K03455 - gmx:100798214 1126.69