Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02217 ATGGAGGGTGGCAACAGACCTGAAGCTGAGCGATGGCTTTACACAGCCAACAAGCTTCTAAGCGCACGTGATCTCCACGGTGCTCGTTCCTTCGCGATCCGTGCCCGAGAATCCGACCCGACTTTCGACGCCTCCGAGCTTCTACTCGCTGTGATCGATACTCTGCTAGCCGGAGAATCGCGGATTAACGATCACCACCGTGATTGGTACGGGATCCTTCAAATCCTCCGCTACTCCACCAATATCGACCATATCGCTAACCAGTATCGCCGCCTCGCTCTCCTCCTTGACCCGAACCGGAACCCGTTCGCTTTCTCCGGTCATGCTTTCTCTCTCGTTCATGATGCTTGGTCTGTTCTCTCCATCCCTGCTAAGAAGGCTATGTACGATAGCGAGCTGCGGTTGCTCACTTCGCCACCTGTTCAGCCACAGCCTCAGCCTCAACCTCCTCCGCAACCGGTGCCACAGTATCAGCAGCCTCAACCTACACCGAAGAAAAATCCTACACCGAGGGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGATGCTGATGCTGATGCGGCTGCGGCTGCGGCTGCGACTGAGCCGATTCGACAGACTCCAAATCGGAACCCTAGCGAGCCAGCTGAGTCGACTCGGCAGACACGGACTGCGAATGCTGCTGAAACGGAAGGTAACGTTAGCTTCTGGACTTTGTGTCCTTACTGTTACGTTTATTATGAGTATCCGAAGGGGTATGAAGAGTGTACCCTGCGGTGTCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGATACGTTCGCCGCCGTTGAATGACATAGATGCTTCGTTTTGCACTTGGGGGTTTTTTCCATTAGGGTTTTCCGGTGATTCTAAAGATGTGAGTGGGACTTCTTCCAATTGGAACCCGGTTTCCCCTCTGTTTCCTTGCTCCTTGAAAGGAGGATCGTCGCGTAGGAAAAAGAATTGGGTTTACTATGATGAAGCGGCAACTGCGGCTTTCATCGATATTTCTGATCCGAGTGACGATGATTCTGATGATGGGGATTGGAGGGAAGGTGCTGGTAAGAAAAGAGGGTTGAAGAGTTCGAATCTTACTCGGAGAAAGATTAGGAAAGATTCTGGTAATGCTAGTGGGAGAGAAACTGTGGAGAGACCTAGGAGGAGTGCTACTGGTGCTGCAGCAGGGGATGTGAGTGAGAAGAATGTTGGTTCTGTTGATTCTTCTAGTGTAAATGCGGAAGCTAGTAAGAAAGCTGTGCCTGCTAGTTCCAAGAAGGTGGCTGTAAACTTGGGTAAATTGGATTTGAATGTTGAGTGCAGTAACGAGGCAGAGGAGCCTTCCCGTGGAGTCCGTAACCGTGAAGGGAATGCAACTGGTAATGCTGAGGATAATATTGAAGGGATTGGTTTTTTTGAGGGTCTTGATGAGTTCCTCAGTAGCTTGCCCATTCTTAATGCGGTGGCAGATGATAAGGTTAAGGGTCATTAG 1542 0.5175 MEGGNRPEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLAVIDTLLAGESRINDHHRDWYGILQILRYSTNIDHIANQYRRLALLLDPNRNPFAFSGHAFSLVHDAWSVLSIPAKKAMYDSELRLLTSPPVQPQPQPQPPPQPVPQYQQPQPTPKKNPTPRAGAGAGAGAGAGAGAGAGAGAGAGAGADADADAAAAAAATEPIRQTPNRNPSEPAESTRQTRTANAAETEGNVSFWTLCPYCYVYYEYPKGYEECTLRCQSCRRGFHAVVIRSPPLNDIDASFCTWGFFPLGFSGDSKDVSGTSSNWNPVSPLFPCSLKGGSSRRKKNWVYYDEAATAAFIDISDPSDDDSDDGDWREGAGKKRGLKSSNLTRRKIRKDSGNASGRETVERPRRSATGAAAGDVSEKNVGSVDSSSVNAEASKKAVPASSKKVAVNLGKLDLNVECSNEAEEPSRGVRNREGNATGNAEDNIEGIGFFEGLDEFLSSLPILNAVADDKVKGH 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02217 513 Pfam DnaJ domain 68 130 IPR001623 -
Vifa6g02217 513 MobiDBLite consensus disorder prediction 383 404 - -
Vifa6g02217 513 MobiDBLite consensus disorder prediction 354 441 - -
Vifa6g02217 513 MobiDBLite consensus disorder prediction 137 237 - -
Vifa6g02217 513 CDD DnaJ 68 121 IPR001623 -
Vifa6g02217 513 SUPERFAMILY Chaperone J-domain 64 134 IPR036869 -
Vifa6g02217 513 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 390 - -
Vifa6g02217 513 SMART dnaj_3 67 125 IPR001623 -
Vifa6g02217 513 MobiDBLite consensus disorder prediction 419 434 - -
Vifa6g02217 513 Gene3D DnaJ domain 62 138 IPR036869 -
Vifa6g02217 513 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Vifa6g02217 513 MobiDBLite consensus disorder prediction 214 237 - -
Vifa6g02217 513 MobiDBLite consensus disorder prediction 140 167 - -
Vifa6g02217 513 MobiDBLite consensus disorder prediction 459 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02217 Vifa-Chr6 788069218 788070759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02217 224 512 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.358 1.14e-53 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02217 - - cam:101509006 669.848