Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02203 ATGACTCAACTTGATCATTACTTCAGTCAGCAACAAAAGCATCTATTCTCTCCTGTACGCCGTACAATCACCGCTTCTGGTGATCAAGTTCCTCTTTCCTGCATCGCTGTATTGCTAAATGGTAGGCGAAATTCTAAAGCTGTTGGACCTTTAAAAGAGTCCCTTAAAGCCAAGGAATATTTCCATTTAGAAGGTTTGAGTTCTTGTTTCTCCAAGTTGAAGCCGGAAGAGGGCCTCGCTCTTGTAAATGGTTCAACTGTTGGATCTGGTGTCCCTTCTACGGTGCTTGATGATGTTTTCGATTACAAATCCCTTTGGATGAGAATTTGCATAGAGAATGTGAATATTTGGACCCGCAGACGTACTGAAGGTCGTAATGTCGTGTCATTGAAACTTTGTCCCAATAGTTGGGGCTTCATGAAGGCCTTTGAAATAGTCAATGAGGCAATGAACATTGCCCCCACAATGGGTTTGTTATTTTCCTTTTATGAGGTAAAAGGGGCCGAGAAGCTTTCTTGGATGCAGATCAATGGTCTTCCCCAAAAGAGTTTTCCCCAAGTGTATACCTCCAACTATAAGGGTTTCAAAGATCTCTCTGTAGCCGAACAAAATAAACTGATCCAAGATGCCAAAGCGGCTCCGAAAGGAGCCGACGGACCCTCCGTGATTAAATTGGACCTTTCCGGGTTGGAAACCCGGTCAAGTGATGATTATGAGAAGATGGAGCTAAAGCTAAAGGAGGAAATAACCCGACTGAACGAGGTTCAGAAGGCTCCATCTAAGAAGCTGTCTGATGTGGAGAAGAGCTTGGCTAAGGAGAAAGAGCATAGGGAGACCCTAGATTCTAAGAGCAAGGCATCTCTTACCCAACTCAATGAGAAGTTGAAGGTGGAGAAGGCCACCAATTATTAG 912 0.4408 MTQLDHYFSQQQKHLFSPVRRTITASGDQVPLSCIAVLLNGRRNSKAVGPLKESLKAKEYFHLEGLSSCFSKLKPEEGLALVNGSTVGSGVPSTVLDDVFDYKSLWMRICIENVNIWTRRRTEGRNVVSLKLCPNSWGFMKAFEIVNEAMNIAPTMGLLFSFYEVKGAEKLSWMQINGLPQKSFPQVYTSNYKGFKDLSVAEQNKLIQDAKAAPKGADGPSVIKLDLSGLETRSSDDYEKMELKLKEEITRLNEVQKAPSKKLSDVEKSLAKEKEHRETLDSKSKASLTQLNEKLKVEKATNY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02203 303 MobiDBLite consensus disorder prediction 256 303 - -
Vifa6g02203 303 Gene3D - 10 85 IPR024083 -
Vifa6g02203 303 PANTHER HISTIDINE AMMONIA-LYASE 18 99 IPR001106 -
Vifa6g02203 303 SUPERFAMILY L-aspartase-like 18 106 IPR008948 GO:0003824
Vifa6g02203 303 Coils Coil 238 258 - -
Vifa6g02203 303 MobiDBLite consensus disorder prediction 284 303 - -
Vifa6g02203 303 MobiDBLite consensus disorder prediction 256 283 - -
Vifa6g02203 303 Pfam Aromatic amino acid lyase 19 99 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02203 Vifa-Chr6 786136794 786141376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02203 18 98 Monolignol Biosynthesis Gene Families AT3G10340 67.901 2.19e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02203 K10775 - gmx:100787872 109.383