Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa6g02146 | ATGGCGGAGCGTGCTTCTCACGGACTGGCTCCTCGATTAGATATTCAGCAGTTACATCGTGAAGCCCAGCATCGGTGGTTACGTCCTGCAGAAATATTGGAAATTCTTAGTAATTTTAAGTTGTTTCAAATCACGCCAGAACCGCCTAATAGGCCACCGAGTGGATCACTTTTTCTTTTTGATCGGAAGGTTTTGAGATATTTCAGAAAGGATGGACACAACTGGAGAAAGAAGAAAGATGGAAAAACTGTGAGGGAAGCTCACGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAGAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAAACGGATATGATGCATATAGTATTTGTCCACTACTTGGATGTTAAGATTAACAAGACAAATATTGGTGCAAGTACAGATACTAATGGGGTTACATCAGATTCCTACAAGGGCATATCTGTGTCATCTGGATTTCCTGCAAATTCTGTTAACATGCCTTCAGGAAGTGCGGATTCCATGAGCCCAACAAGCACATTAACTTCTTTATGTGAAGAAGCAGATTCAGAGGATATTCATAAAGCAAGCCCGAGATTTCACACCTTTCATGAGTCGCAAAATCTGGGGAATGGTCCACTGATGGGTAAGATTGATGCTCATTCAAATAATTCATATCTTACACATCCCTTTTCAGGACCTAATTTCCTACCACTTGTTCAAGGGGGTAAATCCAATCCCAGTGATACTACATACATCGAGGGTCAGGGAGCACTCAACATAGTATCCTGGGACAATGACATGGAGAAATCTGCAGGATTGTATGTTGATCCTTCCCCTGTATCGTCTAATTCTATTCCATCAAGTTCAATCAGCAACTTCCTTGAACAAGAACACGCTGTCTTTACTGAAGGAAGGGCCTCACAGTCTCTCCAATCAAATTGGCTGATTCCTTTTGAAGACAATACAGGAGAATTTCCTAAATGGAGCTTTACTCAATCGTTGACTTCGGAATTTGAATCTGATTATTCCGCTGAACTACTGGGAAAAGAAACTAATAATGCAAGTCCAGAAATTGGTTTGGACCCATTTTATTTTAATTATGAACCAAAAGAGCAGCCTGTCCAGCAAAACATGTCAAATGAGCATGCACAATCTCAGGATGCACTGAAATCTGATTTTGAATCTCATGGCGAACCCAATGTCAACAATGCATTGAACATGAAACGTGTTTTTATGGATGCAGAAGAAAGCCTGAGTAAGGTTGATAGCTTCTCTAGGTGGATGTCTACAGCATTTGCATCGGTGGATGATCTGCACATGCAGTCTTCCCTTGGTATTCCATGGGGCACAGATGAATGTGGGAATATGATAGATGATACCTCATTGAACCTTTCCCTATCTCAAGACCAGCTCTTTAGCATACATGATTTTTCACCTAAATGGGCTTATGCTGAATCAGAAATTCAGGTGTTTATTATTGGAACATTTTTGAAGAGTAAACCAAATGTGGAAACATGTAACTGGTCCTGTATGTTTGGGGAAGTTGAAGTTCCAGCTACCGTTTTAGCTAATGGAATTCTATGCTGTCAAGCTCCACCTCTTGAGATTGGACTGATCCCTTTCTACGTAACTTTTTCCAATAGATTTGCTTGTAGTGAAGTTCGGGAATTTGAGTTCAGAGAGGACTCCAATAGAAATGTAGATTTAACAGAATTTTTTAACAGCTCTACTGAAATGACGCTTCATTTGCAACTGGAAGAGTTACTTACTTTGAATTTAGTACATCTTCCAGATCAAGTTTTTGAGGATGATATGGAGAAACGAAACTTGATTCTTAAGCTTATTTCACTGAAAGAGGAAGAGGAACATTTGAGTAATGAAGAGCCAACTGGAGAGATGGATATATCAAAATACATGTTGAAGATGCATACGTTTCACAGGCAGGTTAAGGAAAAGTTGTACTCATGGCTTCTTCACAAAGTAACTGAAACTGGTAAAGGACCTCATGTGATTGGTAAAGATGGGCAAGGTGTATTACATTTAGTTGCTGCTCTTGGTTATGATTGGGCCATATCACCAATTGTAACTTCTGGAGTTAATATCAACTTCCGTGACGTGAATGGATGGACTGCTCTACACTGGGCTGCATCATGTGCCAGGGAACGAACAGTTGGTCTCCTTGTCTCCATGGGTGCAGCTGCTGGAGCCTTGACAGATCCATGTCCAGCATTCCCTTCAGGAAGAACACCTGCAGATCTTGCTTCTAGCTGTGGCCACAAAGGAATTTCAGGTTTTCTTGCCGAGTCATTATTAACTAGTCACCTTGAATCACTCAGAGTGGCTGATGCAAATGAAGATGGTACAAAAGAAAAAGTCGTACAGACGATTTCAGAACGAAGTGCGACACGTGTGCTCTTGGAAGATACACCAGATGTTATCTGCCTTAAGGATTCTCTTGATGCTGTCCGCAATGCTACACAAGCTGCTGATAGAATACATCAAGTATATAGAATGCAATCATTTCAAAGAAAGCAGTTAGCTCAGTATGACGATGATGATGAGTTTGGATTGTCAGATCAGCAGGCTCTTTCTCTTTTAGCTTCTAAGGCTTGCAAATCCACTCATGGGAAAGGTTCAGCAAATGCTGCTGCAGTACAAATACAGAAAAAGTTTCGTGGCTGGACAAAGAGAAAAGAATTCTTGTTCATTCGTGAAAGAGTTGTTAAAATCCAGGCCCACGTAAGAGGTCACCAGGTAAGAAAGAAGTTTAAATCAATCATTTGGTCTGTGGGAATCCTGGAGAAGGTTGTATTACGGTGGAGGCGTAAGGGCAGTGGTTTACGTGGATTTCGACCATATGCCGTAAATAATGTCCCCAACCAACCAAACAACGATCTTGTGAAGGAGGATGATTATGATTTTTTCAAGGAAGGGAGGAAACAGAGTGAAGAAAGGTTCCAAAAGGCTCTTTCAAGGGTTCAGTCCATGGTTCAGTATCCAGAAGCTCGTGCTCAGTACAGACGACTGCTAAATGTAGTAGATGATTTCCGTCACAAGCAGCCATGTAATTTGGGTTTGAAGAATTCAGAAGAAGCCGATAATGGTGTGGAGGATTTGATTGATATTGACATGCTTTTAGATGATGCTAATTATTTACCCATAGAATTGGATTGA | 3192 | 0.4098 | MAERASHGLAPRLDIQQLHREAQHRWLRPAEILEILSNFKLFQITPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLETDMMHIVFVHYLDVKINKTNIGASTDTNGVTSDSYKGISVSSGFPANSVNMPSGSADSMSPTSTLTSLCEEADSEDIHKASPRFHTFHESQNLGNGPLMGKIDAHSNNSYLTHPFSGPNFLPLVQGGKSNPSDTTYIEGQGALNIVSWDNDMEKSAGLYVDPSPVSSNSIPSSSISNFLEQEHAVFTEGRASQSLQSNWLIPFEDNTGEFPKWSFTQSLTSEFESDYSAELLGKETNNASPEIGLDPFYFNYEPKEQPVQQNMSNEHAQSQDALKSDFESHGEPNVNNALNMKRVFMDAEESLSKVDSFSRWMSTAFASVDDLHMQSSLGIPWGTDECGNMIDDTSLNLSLSQDQLFSIHDFSPKWAYAESEIQVFIIGTFLKSKPNVETCNWSCMFGEVEVPATVLANGILCCQAPPLEIGLIPFYVTFSNRFACSEVREFEFREDSNRNVDLTEFFNSSTEMTLHLQLEELLTLNLVHLPDQVFEDDMEKRNLILKLISLKEEEEHLSNEEPTGEMDISKYMLKMHTFHRQVKEKLYSWLLHKVTETGKGPHVIGKDGQGVLHLVAALGYDWAISPIVTSGVNINFRDVNGWTALHWAASCARERTVGLLVSMGAAAGALTDPCPAFPSGRTPADLASSCGHKGISGFLAESLLTSHLESLRVADANEDGTKEKVVQTISERSATRVLLEDTPDVICLKDSLDAVRNATQAADRIHQVYRMQSFQRKQLAQYDDDDEFGLSDQQALSLLASKACKSTHGKGSANAAAVQIQKKFRGWTKRKEFLFIRERVVKIQAHVRGHQVRKKFKSIIWSVGILEKVVLRWRRKGSGLRGFRPYAVNNVPNQPNNDLVKEDDYDFFKEGRKQSEERFQKALSRVQSMVQYPEARAQYRRLLNVVDDFRHKQPCNLGLKNSEEADNGVEDLIDIDMLLDDANYLPIELD | 1063 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa6g02146 | 1063 | ProSiteProfiles | Ankyrin repeat profile. | 713 | 745 | IPR002110 | GO:0005515 | |
Vifa6g02146 | 1063 | SMART | CG_1_2 | 18 | 136 | IPR005559 | GO:0003677 | |
Vifa6g02146 | 1063 | FunFam | Calmodulin-binding transcription activator 2 | 885 | 933 | - | - | |
Vifa6g02146 | 1063 | Pfam | IPT/TIG domain | 480 | 553 | IPR002909 | - | |
Vifa6g02146 | 1063 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 887 | 936 | IPR027417 | - | |
Vifa6g02146 | 1063 | Gene3D | - | 642 | 787 | IPR036770 | - | |
Vifa6g02146 | 1063 | SMART | iq_5 | 885 | 907 | IPR000048 | GO:0005515 | |
Vifa6g02146 | 1063 | SMART | iq_5 | 908 | 930 | IPR000048 | GO:0005515 | |
Vifa6g02146 | 1063 | PANTHER | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA | 13 | 1023 | - | - | |
Vifa6g02146 | 1063 | Coils | Coil | 613 | 633 | - | - | |
Vifa6g02146 | 1063 | MobiDBLite | consensus disorder prediction | 379 | 404 | - | - | |
Vifa6g02146 | 1063 | Pfam | CG-1 domain | 21 | 134 | IPR005559 | GO:0003677 | |
Vifa6g02146 | 1063 | SUPERFAMILY | E set domains | 480 | 566 | IPR014756 | - | |
Vifa6g02146 | 1063 | SUPERFAMILY | Ankyrin repeat | 639 | 773 | IPR036770 | - | |
Vifa6g02146 | 1063 | FunFam | Calmodulin-binding transcription activator 2 | 473 | 569 | - | - | |
Vifa6g02146 | 1063 | Gene3D | - | 886 | 933 | - | - | |
Vifa6g02146 | 1063 | Pfam | IQ calmodulin-binding motif | 888 | 906 | IPR000048 | GO:0005515 | |
Vifa6g02146 | 1063 | Pfam | IQ calmodulin-binding motif | 912 | 930 | IPR000048 | GO:0005515 | |
Vifa6g02146 | 1063 | ProSiteProfiles | IQ motif profile. | 886 | 915 | IPR000048 | GO:0005515 | |
Vifa6g02146 | 1063 | Gene3D | Immunoglobulins | 473 | 570 | IPR013783 | - | |
Vifa6g02146 | 1063 | ProSiteProfiles | IQ motif profile. | 909 | 933 | IPR000048 | GO:0005515 | |
Vifa6g02146 | 1063 | ProSiteProfiles | Ankyrin repeat region circular profile. | 713 | 738 | - | - | |
Vifa6g02146 | 1063 | ProSiteProfiles | CG-1 DNA-binding domain profile. | 15 | 141 | IPR005559 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa6g02146 | Vifa-Chr6 | 772676172 | 772683636 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa6g02146 | 1 | 1040 | CAMTA Transcription Factor Family | AT5G64220 | 50.424 | 0.0 | 974 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | CAMTA | Vifa6g02146 | CG-1 | 2.9e-51 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa6g02146 | K21596 | - | gmx:100795682 | 1506.12 |