Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02100 ATGGCCTTCCAACTGGGAGCAAGAATTAATGGAATCACACCAAACAGTTTGGAGATTGATATACCTATGCATGCTAATAGTACTCTCAAAACTGAAAAAGAGAGCAACAACATTGATTACTTTCAAAGAGCACAGTGGCTTAGAGCAGCCATGTTAGGAGCCAACGATGGATTAATCACTGTTGCCTCATTGATGATTGGTGTTGGAGCTATAAAAGAAGACATCAGTGTGATGCTTCTTGCAGGTTTTGCTGGTTTGGTAGCTGGTGCTTGTAGCATGGCAATTGGTGAGTTTGTGTCTGTGTATACACAATATGACATTGAGGTAGCTCAGATGAAAAGAGAAAGAGAAGCTAATAATACTAATGGAGTAGTTAATGATGAAAGTGCCGAAAGGGAGAAATTGCCGAATCCGTTTCAGGCAGCCTTGGCATCAGCACTAGCATTTTCTGTTGGTGCTGTTATGCCATTGCTAGCGGCTGCGTTTATAAAGGATCATAGGATTAGGATGAGTGCTGTTGCTGCTGTTGTTAGCATGGCACTGTTAGTGTTTGGAGGAATTGGAGCATTGGTTGGAAAAACTCCAGTGATGAGGTCTTGTGTTAGGGTTCTTATTGGTGGTTGGATGGCTATGGCTATTACTTTTGGTTTCACCAAACTGATTGGCACTACTGGACTTTGA 681 0.4214 MAFQLGARINGITPNSLEIDIPMHANSTLKTEKESNNIDYFQRAQWLRAAMLGANDGLITVASLMIGVGAIKEDISVMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEVAQMKREREANNTNGVVNDESAEREKLPNPFQAALASALAFSVGAVMPLLAAAFIKDHRIRMSAVAAVVSMALLVFGGIGALVGKTPVMRSCVRVLIGGWMAMAITFGFTKLIGTTGL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02100 226 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 221 IPR008217 GO:0005384|GO:0030026
Vifa6g02100 226 Pfam VIT family 47 123 IPR008217 GO:0005384|GO:0030026
Vifa6g02100 226 Pfam VIT family 131 218 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02100 Vifa-Chr6 760149457 760150137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02100 26 226 Nodulin-like Gene Family AT3G43660 61.881 9.59e-91 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02100 K22736 - gmx:100802489 303.138