Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02098 ATGGCTGTTAGTACAATATGTGATTCTGAATCACTCAACCATGCAGCCACAAAAGAAATAGATGAAAAGAAAATCCAAGTCACTGAAAATAATAACCAGAACACTGATATTAACTATTGGCAAAGGGCACAATGGCTTCGCGCCGCGGTATTAGGAGCTAACGACGGATTGGTTTCCGTTGCATCACTAATGATGGGCGTAGGGGCCGTTAAAAAAGACATCAGAGCAATGTTGGTGGCCGGCTTCGCGGGGTTGGTCGCCGGAGCATGTGGTATGGGAATAGGAGAATTTGTTTCTGTTTACACTCAATATGAAGTTGAAGTAGGTCAAATGATGAGAGAGATAGGCACAAGTGATAGGGCGGAGAAAAAGTTGGAGAATGAATTGGAGAAGAGAAAATCATTGCCTAATCCAATGCAAGCTGCTTCAGCTTCTGCGTTTTCGTTTTCGATTGGTGGTTTGGTTCCTTTACTTTGTGGTTCTTTTATAAGTGATTATAAGATTAGGGTTATTGTGATGGTTGCAATATCTAGTTTTGCTTTGGTTGTTTTTGGAAGAGTTGGTGCCGTGCTTGGTAAGACACCAAAGATGAAAGCTTCTATTAGGTTTCTTCTTGGTGGATGGATGGCTATGGCTATCACTTTTGGGTTAACTAAATTACTTGCACATTGTAGTGGTTTGGATTTGGATATCTAA 696 0.4109 MAVSTICDSESLNHAATKEIDEKKIQVTENNNQNTDINYWQRAQWLRAAVLGANDGLVSVASLMMGVGAVKKDIRAMLVAGFAGLVAGACGMGIGEFVSVYTQYEVEVGQMMREIGTSDRAEKKLENELEKRKSLPNPMQAASASAFSFSIGGLVPLLCGSFISDYKIRVIVMVAISSFALVVFGRVGAVLGKTPKMKASIRFLLGGWMAMAITFGLTKLLAHCSGLDLDI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02098 231 CDD Nodulin-21 44 196 - -
Vifa6g02098 231 Pfam VIT family 118 218 IPR008217 GO:0005384|GO:0030026
Vifa6g02098 231 Pfam VIT family 46 129 IPR008217 GO:0005384|GO:0030026
Vifa6g02098 231 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 23 223 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02098 Vifa-Chr6 759808056 759808751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02098 19 221 Nodulin-like Gene Family AT3G43660 56.650 4.20e-80 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02098 K22736 - gmx:100810586 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g02098 6 759808056 759808751 Vifa6g02098 6 759808056 759808751 ECH