Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02096 ATGGATACATGGAAAATCTTGGGAGAGCTGAAACCAGTAATGCTGATGGTTTTGGTGCAAATTGCATATGCTTCTTCAAATGTGTTTTACAAAATTCTTATCAATGATGGAATGAGTATAAGGGTAGTAACTTCCTACCGTCTCATTTTTGGAGCTGCCTTCTCTTTTCCTCTTGCTCTTGTTTTAGAGAGAAAGAACAAACCAAAACTCACATGGAGGGTGTTTTTTATGTCCTTTTCTTGCGGCTTATTCGGAGGGAGTTTATTCCAAAACCTTTTTTTCACCGCATTGGCTTTGGTATCAGCAACATTTGCTTCTGCTGTTTTTAATCTCGTTCCTCTCATCACTTTCATCCTTGCTATCTTGTGCCGCTTAGAAATGTTAAATATGGGAACCATAGCAGGGAAGGTAAAGATATTGGGAACAATAACAGGAGTTATTGGGTCAATGATTCTGATATTTTTCAAAGGAGCAGAAATCAACATTTGGAAAGTCCACGTCAATCTTTTGCATGGTAATCAAAATAACAGCAACGTAGGAACAACTAATTCTGACAGCATTAAAAAAGTTGTCGGTGTTTTATGTGCTCTCGGAAGCTGTTTCAGTTTTTCATTATGGCTCATTATTCACGCTAAGATGACTAAAGAGTATCCGAGTTATTACTCAAGCACAACGCTGATGAATCTAATGGGAGCAATACAAGCCACAATTTTTGCCCTATGTGTTGAGAAAGATTGGAGTCAATGGAAATTGGGTTGGAGTTTCAGACTTCTAACTGTAGCTTATTTGGGAATTGTGACATCTGGATTAGTGTTTATTTTGACAGCTTGGTGTGTAAGGAAGAAAGGTCCAGTGTATGCATCTGCATTCAACCCTCTTAATCTTTTGATTGTGGCCATTGTTGCTTCCTTGTTGTTAGATGAAACTCTCTACCTAGGAAGTGTGATTGGAGGCGTGCTAATTGTTGGTGGTTTGTACATGGTGTTATGGGGTAAGAGTAAAGAAACAAACTTCATTGCCCATGAATTTGAAGGATCAACTGAGGTTGTTGTTATGTCGTCGATGACAACTGATCATGATTTGGTCACTGCAGCAACAATAGCCGCACCAAAGACTAGGAGGAATTTTATTGTTAAATAG 1140 0.386 MDTWKILGELKPVMLMVLVQIAYASSNVFYKILINDGMSIRVVTSYRLIFGAAFSFPLALVLERKNKPKLTWRVFFMSFSCGLFGGSLFQNLFFTALALVSATFASAVFNLVPLITFILAILCRLEMLNMGTIAGKVKILGTITGVIGSMILIFFKGAEINIWKVHVNLLHGNQNNSNVGTTNSDSIKKVVGVLCALGSCFSFSLWLIIHAKMTKEYPSYYSSTTLMNLMGAIQATIFALCVEKDWSQWKLGWSFRLLTVAYLGIVTSGLVFILTAWCVRKKGPVYASAFNPLNLLIVAIVASLLLDETLYLGSVIGGVLIVGGLYMVLWGKSKETNFIAHEFEGSTEVVVMSSMTTDHDLVTAATIAAPKTRRNFIVK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02096 379 Pfam EamA-like transporter family 192 329 IPR000620 GO:0016020
Vifa6g02096 379 Pfam EamA-like transporter family 11 144 IPR000620 GO:0016020
Vifa6g02096 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 144 - -
Vifa6g02096 379 PANTHER WAT1-RELATED PROTEIN 11 342 IPR030184 GO:0016020|GO:0022857
Vifa6g02096 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02096 Vifa-Chr6 759113229 759125803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02096 10 335 Nodulin-like Gene Family AT1G25270 42.638 4.08e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02096 - - gmx:100815160 441.039