Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02094 ATGTGCCAATTAAGAGGAATTCATCCCACCCTGGCTGTTACGGATTCGCCAAACATTTCAAAGTCGGTTAGTGCTCCTTCTCCCTCGCTGGAAGATGGGAAGTATGTGGGATATGTTGAAGCCAGCTTTGTTAATGGTTTTGGTGCAAATACCTATCGCCTTGCCTTTGCTGCCATTACCACTATTCCTCTTGCTCTTATTTTTGAAAGGAAGAGGCCACAGATGACTTGGAGGGTGTTTTACCTTTCACTTCTAAGTGGATTATTTGCTGGAGCATTATTTCAAAACCTTTTCTATAGAGCTCTGGTTTTGTCATCAGCAACTCTTGTTTCAGCTATCTACAACCTTATTCCCACCATCACCTTTGTATTAGCCGTATCCTTCGGTTTAGAGAAATTAAATTGGGCAGCACCTGCAGGAAAGGCAAAGGTTGCAGGAACTATAGTTGGACTTGTAGGGGCTTTGGTTTTAACATTTTACAAAGGAGTTGAATTTGATATTTGGCCGTTTAAAATCAATCTTTTGGATCCAAAAGACAGAGAAATAGGACATGTCACTGATAGTACCACTGAATTGTTAGGTGTTCTATGTGCTGTAGTTAGTTGCGTTTGTTTCTCAATCTGGCTCATCATTCAGGCTAAGATCAGTTTTATAGTTGAGAGGGATTTGAATCAATGGAAGCTTGGTTGGGATATCAGGCTTCTCACTGTCGCATTTTCGGGAATTGGAGCTTCAGGACTAATGATTCTTGCCATGGCATGGGTTGTACAAGCGAAAGGCCCTCTATATGCATCGGCTTTCAACCCTCTATTGCTTTTTATTGTGGCCATTGTTGCATCTATGGTTTTAGATGAGAAGTTAAACTTAGGAAGTTTACTTGGAGGAGTGTTGATTGTGTGTGGCTTATACACGGTACTATGGGGTAAAGGAAGAGAAACACAAAAGAAAAAGATTGCACAAGCACCCTCACCCTCAGAAATCATTGGTGATCTCGAATCTACGACACCATTGTTGAGTTTATGA 1023 0.4125 MCQLRGIHPTLAVTDSPNISKSVSAPSPSLEDGKYVGYVEASFVNGFGANTYRLAFAAITTIPLALIFERKRPQMTWRVFYLSLLSGLFAGALFQNLFYRALVLSSATLVSAIYNLIPTITFVLAVSFGLEKLNWAAPAGKAKVAGTIVGLVGALVLTFYKGVEFDIWPFKINLLDPKDREIGHVTDSTTELLGVLCAVVSCVCFSIWLIIQAKISFIVERDLNQWKLGWDIRLLTVAFSGIGASGLMILAMAWVVQAKGPLYASAFNPLLLFIVAIVASMVLDEKLNLGSLLGGVLIVCGLYTVLWGKGRETQKKKIAQAPSPSEIIGDLESTTPLLSL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02094 340 PANTHER WAT1-RELATED PROTEIN 47 313 IPR030184 GO:0016020|GO:0022857
Vifa6g02094 340 Pfam EamA-like transporter family 44 158 IPR000620 GO:0016020
Vifa6g02094 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Vifa6g02094 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02094 Vifa-Chr6 758980875 758991514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02094 52 333 Nodulin-like Gene Family AT1G25270 38.095 1.43e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02094 - - mtr:25493309 449.129