Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02093 ATGGAGAGTATAAGTAGTATATGGCAAGGTTTGAAACCAGACGTGCTAATGGTGTTAGTCCAGATTGCATATGCTGCGGTGACTATAATATACAAGCTCGCAATAAATGATGGAATGAACATGAGAGTTGCCTCAGCATATCGCCTCATTTGTGCATCCGTTTTCACTATCCCAGTTGCTCTTGTTTTTGATAGGAAGAAGAAAGAAAAGATTACTTGGAGTGTGCTTTCTAAGACATTTCTATGTGGATTGTTTGGCGGAAGTTTGTCTCTAAACCTTTATCTTGAAGCACTGGCTTTGACGTCAGCAACATTTATGTTGGTCGTCTTCAACTTAATTCCAGCCATTACGTTCATCATGGCTGTGTGTTTTGGAATGGATAAATTTAATTTGAAGGTGGTGGAAGGAAAGGCCAAGGTTATAGGAACATTACTAGGAATTAGTGGTGCAATGTTGATGATTTTTTTCAAAGCCACCGCTTGCTCTTTCTCGTTGTGGTATATTATTCAGGCTAAGTTGAATGAGGAATACTCAAGTCATCACTCTAGTGCAGCTTTAATATCCATAATGGGAGCCTTTCAAGCAACGGCTATTGCTCTTTGTGTTGAAAAAGATTGGAACCAATGGAAGCTTGGAAACAACCTCAGTATTCTTGCCGTTATTTATCCAGGAATTGTGACCTCTGGATTAGTTGTTGTCGCTACGGCTTGGTGCATAAAGATGAGGGGTCCTCTATTTGCATCTATTTTCAGCCCTTTACAACTCTTTCTTGTAGTTATAGCTGCTTATTTCATGTTGGATGAGAAATTATATTTGGGAAGTATGCTTGGAGCATTGGTGATTGTGTGCGGTCTCTATGCAGTACTTTGGGGTCAAAGCAAAGAAATGAAAAATAAAATGAAGATATTAGAAATCACAAGAATGTCTGAAAATGATGAGCCTGTCGTTATTTCCATGCCTGTTTCTCATGATAGGGTCATCCAAAGCTATCAAAGTTCAGCCATTACTAAAGAGAATGTTGTTAATGATCAATGA 1035 0.3874 MESISSIWQGLKPDVLMVLVQIAYAAVTIIYKLAINDGMNMRVASAYRLICASVFTIPVALVFDRKKKEKITWSVLSKTFLCGLFGGSLSLNLYLEALALTSATFMLVVFNLIPAITFIMAVCFGMDKFNLKVVEGKAKVIGTLLGISGAMLMIFFKATACSFSLWYIIQAKLNEEYSSHHSSAALISIMGAFQATAIALCVEKDWNQWKLGNNLSILAVIYPGIVTSGLVVVATAWCIKMRGPLFASIFSPLQLFLVVIAAYFMLDEKLYLGSMLGALVIVCGLYAVLWGQSKEMKNKMKILEITRMSENDEPVVISMPVSHDRVIQSYQSSAITKENVVNDQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02093 344 PANTHER WAT1-RELATED PROTEIN 15 301 IPR030184 GO:0016020|GO:0022857
Vifa6g02093 344 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Vifa6g02093 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Vifa6g02093 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 206 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02093 Vifa-Chr6 758467620 758469210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02093 11 313 Nodulin-like Gene Family AT1G25270 35.882 8.51e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02093 - - gsj:114424758 392.889