Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02090 ATGGGAATACTAATGCAGGGAGCTATAGCTTCTGGATTACTGATTGTTGTTATTGCTTGGTGCATAAAGATAAGAGGTCCTTTATTTGCATCAGTTTTCAATCCTCTTCAGCTTTTACTTGTGGCTATTTCTGCTTATTTGTTGTTGGATGAGAAGTTATATTTAGGAAGTGTCTTTGGAGCAGTGTTGATCGTATGCGGCATATATGCAGTGCTTTGGAGTAAGAGAAGAGAATTGGAAAATAAGAAAAAGTTATTTCCATTAGAAACCGATATTAAGTCTGAAGTAGTAGAATTTGTTATACCCAATCCATATAAATGA 321 0.3489 MGILMQGAIASGLLIVVIAWCIKIRGPLFASVFNPLQLLLVAISAYLLLDEKLYLGSVFGAVLIVCGIYAVLWSKRRELENKKKLFPLETDIKSEVVEFVIPNPYK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02090 106 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 77 - -
Vifa6g02090 106 Pfam EamA-like transporter family 3 72 IPR000620 GO:0016020
Vifa6g02090 106 PANTHER WAT1-RELATED PROTEIN 3 79 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02090 Vifa-Chr6 758270798 758271225 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02090 3 78 Nodulin-like Gene Family AT3G18200 52.632 4.92e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02090 - - mtr:25493310 137.502