Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02089 ATGGTTAATTTATTCAGTGTTAAAGCCATAGAAAGTGCAAAGCCTATTGTGTTGATGATAGTGGTTCAATCAATATATGCAGTAGTGAATATAATGTTAAAAATGGTAGCAAATGATGGATCAAGCTTAAGTGTTCTTATTGTTTATAGATTTGTATTTTCTACTGCCTTCACTGTGCCATTTGTTTTCTTCTTTGAAAGGAAAAGTGTGCAAAATTTGACTGGAAAGGTGCTATTCCAAGCTTTTCTTTGTGGATTATTTGGGGGATCATTACAACAAAACTTGTATATTGAATCATTGGCTTTGGTATCTGCAACATATACTATAACCATGTTAAACCTCATTCCTGCCATTACCTATGTCCTGGCTGTTTCTCTAAGAATGGAGAAGCCAAATCTTGGAACACCAGCTGGGAAGGCAAAGTTGATGGGAACATTAAGTGGAATTTGTGGTGCAATGATCCTAACTTTATATGAAGGCAAAAGATTATTTAACTTATCATTGCACATTGATTTGTTGCAAAATGTTACATCAACAACACATCATTCCCCTGCTGGTTCTCATGTTTGGGGACTCATGTTAGCTTTAGGCACTGCTCTCAGTTTCTCACTATGGTTTATAACACAGTCGAAGATGAGTGAGAATTTTCCATGGCATTATTCAATTGCGGCTTTAACCTCTATAATGGGTGCAATCCAATCTTTCATATTTGCGATTTGTACCGAGAGAGATTGGAGCCAATGGAAGCTTGATTGGAATTTGAGGCTTTTGACAGCAGCTTCCGCGGGTATATTGGCCTCTGGAGTGTGCTTTGTTCTGTTGGCTTGGTGTGTGGGCATGAAGGGACCCTTGTATGTGTCTGCTTTTAATCCTCTAATGCTCGTTCTCGTGGCCTTCATTTCGTCGTTCGTATTGAATGAATACATTACAGTTGGAAGTCTAACAGGAGCCGCGTTGATTGTTTGCGGATTGTACATGTTACTATGGGGTAAAAGCAAAGAAGCGAGGAAAATGCATAATATAAATGAAATAGCTTCTGCAATAGACACTGTTGAATGTGATTCATTTCACAAAGCCAACAACTCAGCTTTATCTTGCATACAGAAGGAGCATGACAAGAAGATGGCAACTATTGGTCCCAATGTATCACGAAATATCAACAACAATACTTTAGGGGAAATCCAAACAAACATTTGA 1197 0.3818 MVNLFSVKAIESAKPIVLMIVVQSIYAVVNIMLKMVANDGSSLSVLIVYRFVFSTAFTVPFVFFFERKSVQNLTGKVLFQAFLCGLFGGSLQQNLYIESLALVSATYTITMLNLIPAITYVLAVSLRMEKPNLGTPAGKAKLMGTLSGICGAMILTLYEGKRLFNLSLHIDLLQNVTSTTHHSPAGSHVWGLMLALGTALSFSLWFITQSKMSENFPWHYSIAALTSIMGAIQSFIFAICTERDWSQWKLDWNLRLLTAASAGILASGVCFVLLAWCVGMKGPLYVSAFNPLMLVLVAFISSFVLNEYITVGSLTGAALIVCGLYMLLWGKSKEARKMHNINEIASAIDTVECDSFHKANNSALSCIQKEHDKKMATIGPNVSRNINNNTLGEIQTNI 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02089 398 PANTHER WAT1-RELATED PROTEIN 14 338 IPR030184 GO:0016020|GO:0022857
Vifa6g02089 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 333 - -
Vifa6g02089 398 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Vifa6g02089 398 Pfam EamA-like transporter family 14 138 IPR000620 GO:0016020
Vifa6g02089 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02089 Vifa-Chr6 758227956 758229935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02089 14 336 Nodulin-like Gene Family AT1G25270 38.769 1.15e-78 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02089 - - psat:127105848 744.962