Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02081 ATGGCGTCGTCCAAGGTTGTTGTTGTCTCAACAAATCCGGATCTGCCACGCGCCTCTTCTATAACATCATCATCCTCCTCTTGTTTTCATCTCTCCTATTCAAATCAACCTCCCAAGAAACCTACCACCATGGACGAAATTCTCAAGAACATTTACCCCGCCGCAATAGAAGTCTTCAAAATACAACAAAAACTAAAACAAGAACAACAAGAAGAAGAACAACAACAACATTTCCTCTTCAACAACACAATTGATGATGTATGGACGGATATCGTCGCCGACGCTGGTGTCGGCGCAACCCCTTATCATCCTCATCAATATCAATATCCATATCAACATCAAGATGAATATCAATATCAACAACATCCTTCTTTTGATGAAGGTTTCTCTGCCTGTACCGGCGGTGACAATACTCTAGAAGATTTCTTGGTGAAAGCCGGTGCTCTTCCTGTCTCTCATCTTCCTCAATATTCTTCCTCTTCTGAACCTTCACATTCTCTTGATGTTGCTGCTGTGGGAAAACGAAAGGCTGTTGCGGAAGCAGTTGAGCTTGATAAAGCTGCTCTTCAGAGACAGAAAAGAATGATCAAGAATCGTGAGTCTGCAGCCAGGTCCAGAGAACGCAAACAGGCTTATATTAATGAGCTTGAGAGACTTGTCAAGAATTTGGAGACAGAGAATAAGCTCTTAATAGAAGAAGAGGAAGAAAGGAAAAAGGAAAGGCTAAAGCAATTGAAAGAGTTGGTCCTTCCAATAACGGAGCAGAGACAAAATCGGAGACTGCGGAGATCGAATTCAATATAA 804 0.4204 MASSKVVVVSTNPDLPRASSITSSSSSCFHLSYSNQPPKKPTTMDEILKNIYPAAIEVFKIQQKLKQEQQEEEQQQHFLFNNTIDDVWTDIVADAGVGATPYHPHQYQYPYQHQDEYQYQQHPSFDEGFSACTGGDNTLEDFLVKAGALPVSHLPQYSSSSEPSHSLDVAAVGKRKAVAEAVELDKAALQRQKRMIKNRESAARSRERKQAYINELERLVKNLETENKLLIEEEEERKKERLKQLKELVLPITEQRQNRRLRRSNSI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02081 267 Coils Coil 202 248 - -
Vifa6g02081 267 CDD bZIP_plant_BZIP46 190 223 - -
Vifa6g02081 267 Pfam bZIP transcription factor 187 245 IPR004827 GO:0003700|GO:0006355
Vifa6g02081 267 Gene3D - 189 236 - -
Vifa6g02081 267 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 193 208 IPR004827 GO:0003700|GO:0006355
Vifa6g02081 267 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 188 240 IPR004827 GO:0003700|GO:0006355
Vifa6g02081 267 SMART brlzneu 186 250 IPR004827 GO:0003700|GO:0006355
Vifa6g02081 267 SUPERFAMILY Leucine zipper domain 190 242 IPR046347 GO:0003700|GO:0006355
Vifa6g02081 267 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Vifa6g02081 267 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 245 IPR043452 GO:0003700|GO:0045893
Vifa6g02081 267 Coils Coil 179 199 - -
Vifa6g02081 267 PRINTS cAMP response element binding (CREB) protein signature 203 223 - -
Vifa6g02081 267 PRINTS cAMP response element binding (CREB) protein signature 223 240 - -
Vifa6g02081 267 PRINTS cAMP response element binding (CREB) protein signature 185 201 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02081 138 267 bZIP Transcription Factor Family AT5G44080 42.262 2.77e-24 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vifa6g02081 bZIP_1 8.8e-15 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02081 K14432 - cam:101514708 123.635