Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02053 ATGTCATCAGTGAAAGGTTTCTACAAGCAGAAGAAAAACCCCAACACCGCCAACAAATCATCCAAGTCCAGAAAACCTCCGATCCACGCCGCCACTTTCGGTTCCAATCTCGCCCAACCACCAGCACTCACATCCCGCAACGGCAACCCAGATCTCCAAGATGAGTACAGCGAAAGCGAGTCGGTGTTGCGACAATTTGACATGAACACGATTTACGGGCCTTGTATTGGGATGACGAGGCTGGCACGGTGGGAGCGGGCGGTGAATCTTGGTTTGAACCCTCCGCAGGAAATTGAGAGGCTTTTGAAAAGTGGTAAAGTTCAGCAGGAATCCCTCTGGGATTCTCGCATTTAG 354 0.5113 MSSVKGFYKQKKNPNTANKSSKSRKPPIHAATFGSNLAQPPALTSRNGNPDLQDEYSESESVLRQFDMNTIYGPCIGMTRLARWERAVNLGLNPPQEIERLLKSGKVQQESLWDSRI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02053 117 MobiDBLite consensus disorder prediction 1 60 - -
Vifa6g02053 117 MobiDBLite consensus disorder prediction 37 56 - -
Vifa6g02053 117 MobiDBLite consensus disorder prediction 1 25 - -
Vifa6g02053 117 Pfam DNA polymerase delta, subunit 4 53 108 IPR007218 GO:0000731|GO:0006260
Vifa6g02053 117 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 3 115 IPR007218 GO:0000731|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02053 Vifa-Chr6 750720057 750720514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02053 3 117 Core DNA Replication Machinery Family AT1G09815 56.303 2.72e-44 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02053 K03505 - tcc:18599641 153.68