Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02052 ATGTCATCAGGAAATATCAAAGGTTTCTACAAGCAAAGAAAAAACCCCAACACCGCCACTGCCAACGCCAAGAAACCTCCGATCCACGCCGCCACTTTCGGTTCCAATCTCGCCCAACCACCAGCACTCACATCCCGCAACGGCAAACCAGATCTACAAGATGAATTCAGCGATAGCGAGCCGGTGTTGCGACAATTTGACATGAACACGGTTTACGGGCCTTGTATTGGGATGACGAGGCTGGCACGGTGGGAGCGTGCGGTGAATCTCGGTTTGAACCCTCCGCAGGAGATTGAGAGGCTTGTGAGAAGTGGTAAAGTTCAGCAGGAATCCCTCTGGGATTCTCGCATTTAG 354 0.5198 MSSGNIKGFYKQRKNPNTATANAKKPPIHAATFGSNLAQPPALTSRNGKPDLQDEFSDSEPVLRQFDMNTVYGPCIGMTRLARWERAVNLGLNPPQEIERLVRSGKVQQESLWDSRI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02052 117 MobiDBLite consensus disorder prediction 1 60 - -
Vifa6g02052 117 Pfam DNA polymerase delta, subunit 4 53 103 IPR007218 GO:0000731|GO:0006260
Vifa6g02052 117 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 3 115 IPR007218 GO:0000731|GO:0006260
Vifa6g02052 117 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02052 Vifa-Chr6 750576256 750576715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02052 2 117 Core DNA Replication Machinery Family AT1G09815 53.279 1.40e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02052 K03505 - gmx:100778329 151.369