Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02036 ATGGAGAAAATTTTGAAGCAAATTCTAACTCAATTCTTTGTATATTACAAGACATCAAGGAAGGAAACCTATGTAGACTCTCTTGAAAGAAAGGATGATGCTATCGCTGATAACGACAACAATGAAGAAAAAGCCGGAGAAGAAGATGACGCTTCTGATGAAAAGAATAAGCCTTCTACTCGATGTTTCAGCCATGGATGCCATTTAATGGAAGGAGAAATGAATCATGGAATGGAAGACTATGTTTTTGCTCAACACAAAAAGCTCAATGATTACGATTTAGGATTGTACGCAATATTCGATGGACACTCAGGTCGTGATGTTGCAAAATATTTGCAAAACCATCTATTTGAAAATATACTCAATGAGCCTGATTTCTGGGAAAATCCAGTGCATGCTGTTAAGAAAGCAAGTAAAACTACCGACGAGGAGATACTAGAAAACATAGCTGATTGGCGCGGAGGATCAACCGCGGTGGCAGCAATACTGATTAATGGAGTAAAGCTAATTGTAATCAATGTTGGTGATTCTCGAGCAATATCTTGCAAAAACGGTATTGCGAAACAGCTTACCGTTGATCATGAACCGGAGAAGGAAAAAAATTTGGTTGAGAGAAGAGGAGGATTTGTGTCTAAGAGTCCTGGGAATGTTGCAAGAGTGGATGGAGAGTTAGCAATGACAAGAGCATTTGGAGATGGAAAACTGAAAGAGCATATCACTGCAGAACCAGATGTGATGATTAAGAAGATTGATGATGACACTGAATTCATCATTTTGGCAAGTGATGGTTTGTGGAAGGTGATGACAAATCAAGAGGCTTGTGATTGTATTAAGGATGTTGATGATGCTCAAAAAGCAGCTAAAAAGTTAGTGAAAGAAGCAAAATCCATGGGAAGCTATGATGATATTTCATGCATAGTTGTTATGTTCTAG 933 0.3826 MEKILKQILTQFFVYYKTSRKETYVDSLERKDDAIADNDNNEEKAGEEDDASDEKNKPSTRCFSHGCHLMEGEMNHGMEDYVFAQHKKLNDYDLGLYAIFDGHSGRDVAKYLQNHLFENILNEPDFWENPVHAVKKASKTTDEEILENIADWRGGSTAVAAILINGVKLIVINVGDSRAISCKNGIAKQLTVDHEPEKEKNLVERRGGFVSKSPGNVARVDGELAMTRAFGDGKLKEHITAEPDVMIKKIDDDTEFIILASDGLWKVMTNQEACDCIKDVDDAQKAAKKLVKEAKSMGSYDDISCIVVMF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02036 310 FunFam Probable protein phosphatase 2C 39 56 310 - -
Vifa6g02036 310 SMART PP2C_4 54 308 IPR001932 -
Vifa6g02036 310 ProSiteProfiles PPM-type phosphatase domain profile. 64 310 IPR001932 -
Vifa6g02036 310 PANTHER PROTEIN PHOSPHATASE 49 308 IPR015655 GO:0004722|GO:0006470
Vifa6g02036 310 MobiDBLite consensus disorder prediction 35 59 - -
Vifa6g02036 310 CDD PP2Cc 63 308 IPR001932 -
Vifa6g02036 310 Pfam Protein phosphatase 2C 74 303 IPR001932 -
Vifa6g02036 310 SUPERFAMILY PP2C-like 61 310 IPR036457 -
Vifa6g02036 310 Gene3D - 60 310 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02036 Vifa-Chr6 747488574 747489751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02036 61 310 PP2C-type Phosphatase Gene Family AT4G28400 57.769 2.16e-102 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02036 - - gmx:100814772 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g02036 6 747488574 747489751 Vifa6g02036 6 747488574 747489751 ECH