Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa6g02021 | ATGTCTGATGAACCTAGACAACCCTACTTCCAAAACTTCATGCTAGATCATCAAACAACAGATCAAGATCAAGGATCTAACAACATCATGAGTTTCACAGAATGTTTACAAGGAACTAACATGGATCACTACAATTCATCCCTTGCAAACTCTTTTGGAGTACTATCTCCTTCTTCATCAGAGGTTTTTTCATCTGTTGATCAAGGAAATCAACAAAAACCAGAAGTAGGTCCTGATCAAACCCTTGCTAACTCATCTGTCTCTAACTCCTCATCTTCTGAAGCCGGTGTAGCAGAAGAAGATTCAGGAAAACGAAAGAAAAATGGACTAGTTGTTAAAGAAGAACAAGGACAAGAAAACACTAAAAATGGGAACAACAAGGTTGATAAGAAGAAAGGAGAGAAGAAACAGAAGGAACCAAGGTTTGCTTTCATGACAAAGAGTGAAGTTGATCAGCTAGAAGATGGATATAGATGGAGAAAATATGGACAGAAAGCTGTTAAGAATAGTCCATACCCTAGGAGCTATTATAGGTGTACAACACAGAAGTGTACAGTGAAAAAACGCGTAGAAAGATCATATGAAGACCCAACAACTGTGATAACAACATATGAAGGTCAGCATAATCATCCTGTCCCCACTTCTCTTAGAGGCAATGCGGCTTCAATGTTCACACCTTCTTTGCTATCTGCACCTACCCCTTTTTCATATGGATCTAACTTCCCTCAAGATTTTCTTCTCCATATGCACCACCATCATAACAACACCTTCAATATCACTTCTCAACCAACTAGTACTAATTCTGCTTCTCTTGTTGCTGCTTCCATTTATTCACACAACAACAATCTTAACAACTCTCTTCTTCATCACTATCAACAACAACTTGTTCCTGATCAATATGGATTGCTTCAAGATATTGTTCCTTCCATGTTCCTCAACACAACCAACCATAACTGA | 957 | 0.3835 | MSDEPRQPYFQNFMLDHQTTDQDQGSNNIMSFTECLQGTNMDHYNSSLANSFGVLSPSSSEVFSSVDQGNQQKPEVGPDQTLANSSVSNSSSSEAGVAEEDSGKRKKNGLVVKEEQGQENTKNGNNKVDKKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHPVPTSLRGNAASMFTPSLLSAPTPFSYGSNFPQDFLLHMHHHHNNTFNITSQPTSTNSASLVAASIYSHNNNLNNSLLHHYQQQLVPDQYGLLQDIVPSMFLNTTNHN | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa6g02021 | 318 | MobiDBLite | consensus disorder prediction | 124 | 143 | - | - | |
Vifa6g02021 | 318 | SUPERFAMILY | WRKY DNA-binding domain | 145 | 213 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa6g02021 | 318 | MobiDBLite | consensus disorder prediction | 56 | 143 | - | - | |
Vifa6g02021 | 318 | SMART | WRKY_cls | 153 | 212 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa6g02021 | 318 | FunFam | WRKY transcription factor 57 | 139 | 213 | - | - | |
Vifa6g02021 | 318 | Gene3D | WRKY domain | 137 | 214 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa6g02021 | 318 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 60 | 259 | IPR044810 | GO:0003700 | |
Vifa6g02021 | 318 | ProSiteProfiles | WRKY domain profile. | 148 | 213 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa6g02021 | 318 | MobiDBLite | consensus disorder prediction | 98 | 113 | - | - | |
Vifa6g02021 | 318 | Pfam | WRKY DNA -binding domain | 154 | 211 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa6g02021 | 318 | MobiDBLite | consensus disorder prediction | 56 | 97 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa6g02021 | Vifa-Chr6 | 742327144 | 742328756 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa6g02021 | 31 | 312 | WRKY Transcription Factor Family | AT4G18170 | 46.333 | 1.67e-64 | 204 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vifa6g02021 | WRKY | 1.8e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa6g02021 | - | - | cam:101497541 | 347.436 |