Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02016 ATGGCCGCATCATCCATGGCTCTCTCTTCCCCAACCTTGACTGGCAAGCCAGTCAAGCTGAACCCATCAAGCCAAGAATTGGGAGCTGCAAGGTTCACCATGAGGAAGTCTGCTACCACCAAGAAAGTAGCCTCCTCTGGAAGCCCATGGTACGGACCAGACCGTGTTAAGTACTTAGGCCCATTCTCCGGTGAGTCTCCCTCATACTTGACTGGAGAATTCCCAGGTGACTACGGTTGGGACACTGCCGGACTCTCTGCTGACCCAGAGACATTCTCCAAGAACCGTGAGCTTGAGGTCATCCACTCCAGATGGGCTATGTTGGGTGCTTTGGGATGTGTCTTCCCAGAGCTATTGTCCCGCAACGGTGTTAAATTCGGGGAAGCTGTGTGGTTCAAGGCTGGATCTCAAATCTTTAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCTCAAAGCATCCTAGCCATATGGGCCACTCAAGTTATCTTGATGGGAGCTGTTGAAGGTTACCGTATTGCTGGTGGCCCTCTTGGTGAGGTTGTTGACCCACTTTACCCAGGCGGCAGCTTTGATCCATTAGGCTTAGCTGACGACCCAGAAGCATTTGCAGAGTTGAAGGTGAAGGAACTCAAGAACGGTAGATTAGCCATGTTCTCCATGTTTGGATTCTTTGTTCAAGCTATTGTAACCGGAAAGGGTCCTTTGGAGAACCTAGCTGATCATCTTGCCGACCCAGTCAACAACAACGCCTGGTCATATGCCACCAACTTTGTTCCCGGAAAGTGA 801 0.5119 MAASSMALSSPTLTGKPVKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02016 266 MobiDBLite consensus disorder prediction 1 21 - -
Vifa6g02016 266 Gene3D Chlorophyll a/b binding protein domain 57 259 - -
Vifa6g02016 266 SUPERFAMILY Chlorophyll a-b binding protein 49 263 - -
Vifa6g02016 266 Pfam Chlorophyll A-B binding protein 67 232 IPR022796 -
Vifa6g02016 266 FunFam Chlorophyll a-b binding protein, chloroplastic 57 259 - -
Vifa6g02016 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 266 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02016 Vifa-Chr6 740787893 740788693 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02016 1 266 Chloroplast and Mitochondria Gene Families AT2G34430 87.313 3.04e-170 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02016 K08912 - fve:101297707 497.278