Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01977 ATGACTGCTCAACACCCTGCTTTCAAAGTTTTTGCTGCAAAGAAGGGTGGTGGAGGAAGACAATTTAATGGTCTTATTGATGTCTACAAGAAGACATTGGCAACTGATGGTATTGCTGGACTTTACCGTGGTTTCAACATTTCATGTGTTGGAATCATTGTCTACCGTGGTCTCTACTTTGGAATGTATGATTCCCTGAAGCCAGTTCTCCTAACTGGATCTCTGCAGGATAGTTTCTTTGCTAGTTTTGGTCTCGGATGGCTCATCACCAACGGTGCAGGTCTAGCATCTTACCCAATTGACACCGTCAGAAGAAGAATGATGATGACATCTGGTGAAGCAGTCAAGTACAAGAGCTCCATGGATGCATTTTCACAAATCTTCAAGAATGAGGGTTTCAAGTCCTTGTTCAAGGGAGCTGGTGCTAACATCCTCCGTGCTGTCGCTGGTGCTGGTGTGCTTGCCGGTTATGATAAGTTGCAGGTCATTATGCTCGGCAAGAAGTACGGATCTGGCGGTGCTTAA 525 0.4533 MTAQHPAFKVFAAKKGGGGRQFNGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQIFKNEGFKSLFKGAGANILRAVAGAGVLAGYDKLQVIMLGKKYGSGGA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01977 174 Gene3D Mitochondrial carrier domain 1 170 IPR023395 -
Vifa6g01977 174 Pfam Mitochondrial carrier protein 78 164 IPR018108 -
Vifa6g01977 174 Pfam Mitochondrial carrier protein 13 72 IPR018108 -
Vifa6g01977 174 PRINTS Adenine nucleotide translocator signature 27 40 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa6g01977 174 PRINTS Adenine nucleotide translocator signature 82 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa6g01977 174 PRINTS Mitochondrial carrier protein signature 42 60 IPR002067 GO:0055085
Vifa6g01977 174 PRINTS Mitochondrial carrier protein signature 86 108 IPR002067 GO:0055085
Vifa6g01977 174 FunFam Uncharacterized protein 18 163 - -
Vifa6g01977 174 SUPERFAMILY Mitochondrial carrier 16 159 IPR023395 -
Vifa6g01977 174 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 69 IPR018108 -
Vifa6g01977 174 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 163 IPR018108 -
Vifa6g01977 174 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 14 173 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01977 Vifa-Chr6 731380146 731381137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01977 12 174 Antiporters AT5G13490 89.571 2.12e-101 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01977 K05863 - egt:105970511 299.671