Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01974 ATGGGTACAAGAGTAGAGTCAGATGAAGATGGTGATAACAAAGGTAGTATGTGGGAATTGGATCAGAAGCTTGACCAACCTATGGATGAAGAGGCAGGAAGACTTAGAAATATGTACAAAGAAAAGAAATTTTCTGCACTGTTGATTCTGCGGCTTGCATATCAGAGTCTCGGCGTGGTTTATGGAGATTTGGGCACTTCACCCTTGTATGTTTTCTACAATACATTTCCTAATGGTGTGAAAGATGAAGATGAAGTACTTGGAGCTCTTTCTTTGATTATCTACTCTCTTACTTTGGTGCCTCTCCTCAAATATGTTTTTATTGTGTTAAGAGCAAATGACAATGGACAAGGTGGAACATTTGCGCTTTATTCCTTGCTTTGCCGACATGCAAAGATAAAAACCATTCCCAATCAGCATCGTACTGATGAAGAACTAACAACATATAGTCGTTCTACCTTCCATGAAAGGTCATTTGCTGCAAAAACTAAAAGATGGTTGGAGGAACGTGAATCTTGGAAGAGCGCCATTCTTATTCTTGTCCTTGCTGGCACCTGCATGGTTATTGGAGATGGAATTCTTACCCCGGCTATATCAGTTTTATCAGCCGTTGGTGGCATCAAGGTAAATCAGCCCGACATGAATAGCAGTGTAGTAGTTCTCGTTGCTGTTGTAATATTAGTTGGATTTTTCAGTTTGCAACATTATGGAACAGACAGAGTTAGTTGGCTCTTTGCTCCAATTGTTCTCCTTTGGTTTCTCCTAATAGGAGGTATCGGTATATTTAACATCTGGAAGCATGGAAGCAGAGTTCTAAAAGCTTTTTCTCCTGTGTATATATATCACTATTTCAAAAGAGGCGGAAAAAAAGGATGGACTTCCCTTGGTGGTATCATGCTCAGTATAACAGGGACGGAGGCTCTTTTTGCCGACCTAGCTCATTTTCCAGTCTCAGCTGTACAACTTGCATTTACTCTAGTAGTGTTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGCTGCATACCTTATGAATAACATGGCTCATTCACAAGACTCCTTTTATCGTTCTATTCCAGAAAGTATATACTGGCCGGTATTTGTTGTTGCAACAGCTGCAGCTATAGTTGCGAGCCAGGCGACAATAACTGCAACTTTTTCGATTGTTAAGCAAGCCCTTGCTCATGGTTGTTTCCCTAGAGTTAAAGTTGTATATACATCAAGAAAATTTGCTGGCCAGATATATATTCCAGATATTAATTGGGTTCTTATGGTTCTTTGCATTGCCGTCACAGCTGGTTTTGAAAATCAAAACCAGATTGGAAATGCTTACGGTACTGCAGTTGTAATTGTCATGCTCGTTACGACATTCCTTATGATTTTAATCATGATATTAGTGTGGCGCTGCCACTGGATTCTTGTACTCACCTTCACTTGCTTATCGTTGATTGTGGAATTCTCATACTTCTTCTCTGTAATCTTCAAAGTTGATCAAGGTGGATGGGTTCCACTTGTAATTGCGGGAGCATTTCTTGTTATAATGTATGTCTGGCATTACGGTACGCTGAAACGCTACGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTCGGACTCGGCCCAAGTTTAGGACTCGTTCGTGTACCCGGAATCGGACTAGTCTACACAGAACTTGCAAGTGGAGTACCGCCGATATTTTCTCATTTCATCACCAACCTACCAGCCATCCATTCCGTCGTTGTTTTCGTATGCGTCAAATACCTTCCTGTCTACACCGTCCCTGAGGAAGAGAGATTCCTTGTCAAAAGAATCGGGCCAAAGAATTACCACATCTTCCGATGTGTTGCTCGATATGGCTATAAAGACCTTCACAAGAAAGACGACGAGTTTGAGAAAAAACTCTTCGATAACCTTTCGATGTTTGTTAAGCTTGAATCCATGATGGAAGGTTGTTCAGATTCAGACGAATACAGTTTATATGGACAAGAAAAAGAGTTGTTGCCAAGAGATGGCTTGTTGAATAACAACGGGAGCACGTTTTCTTCGAATGTGGAGTTCACAATCAACTCAATTGATTCAATAGTACAAGTTAAATCACCGCCGCCACATGTGAGTAATAATACGGTTAGGTCCTCCGGTCAAGTGAGCAGCCAAACCGAGATCGATGAAGTTGAGTTTTTAAATAACTGCAGGGACGCAGGGGTGGTTCACATATTGGGAAACACAGTTGTAATAGCAAGGAGAGATTCAAATTTCTTCAAGAAATTAGCTGTTGATTATATATATGCATTTCTTAGGAAGATTTGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGATTTTCTCTGTATAG 2385 0.4067 MGTRVESDEDGDNKGSMWELDQKLDQPMDEEAGRLRNMYKEKKFSALLILRLAYQSLGVVYGDLGTSPLYVFYNTFPNGVKDEDEVLGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEERESWKSAILILVLAGTCMVIGDGILTPAISVLSAVGGIKVNQPDMNSSVVVLVAVVILVGFFSLQHYGTDRVSWLFAPIVLLWFLLIGGIGIFNIWKHGSRVLKAFSPVYIYHYFKRGGKKGWTSLGGIMLSITGTEALFADLAHFPVSAVQLAFTLVVFPCLLLAYSGQAAYLMNNMAHSQDSFYRSIPESIYWPVFVVATAAAIVASQATITATFSIVKQALAHGCFPRVKVVYTSRKFAGQIYIPDINWVLMVLCIAVTAGFENQNQIGNAYGTAVVIVMLVTTFLMILIMILVWRCHWILVLTFTCLSLIVEFSYFFSVIFKVDQGGWVPLVIAGAFLVIMYVWHYGTLKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPPIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNYHIFRCVARYGYKDLHKKDDEFEKKLFDNLSMFVKLESMMEGCSDSDEYSLYGQEKELLPRDGLLNNNGSTFSSNVEFTINSIDSIVQVKSPPPHVSNNTVRSSGQVSSQTEIDEVEFLNNCRDAGVVHILGNTVVIARRDSNFFKKLAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFSV 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01974 794 NCBIfam potassium uptake protein 52 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa6g01974 794 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa6g01974 794 MobiDBLite consensus disorder prediction 1 20 - -
Vifa6g01974 794 Pfam K+ potassium transporter 54 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01974 Vifa-Chr6 729913657 729918328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01974 1 794 Inorganic Solute Cotransporters AT2G35060 75.965 0.0 1210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01974 K03549 - gmx:100794454 1364.75