Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01973 ATGGGTACAAGAGTAGAGTCAGATGAAGATGGTGATAACAAAGGTAGTATGTGGGAATTGGATCAGAAGCTTGACCAACCTATGGATGAAGAGGCAGGAAGACTTAGAAATATGTACAAAGAAAAGAGTCTCGGCGTGGTTTATGGAGATTTGGGCACTTCACCCTTGTATGTTTTCTACAATACATTTCCTAATGGTGTGAAAGATGAAGATGAAGTACTTGGAGCTCTTTCTTTGATTATCTACTCTCTTACTTTGGTGCCTCTCCTCAAATATGTTTTTATTGTGTTAAGAGCAAATGACAATGGACAAGGTGGAACATTTGCGCTTTATTCCTTGCTTTGCCGACATGCAAAGATAAAAACCATTCCCAATCAGCATCGTACTGATGAAGAACTAACAACATATAGTCGTTCTACCTTCCATGAAAGGTCATTTGCTGCAAAAACTAAAAGATGGTTGGAGGAACGTGAATCTTGGAAGAGCGCCATTCTTATTCTTGTCCTTGCTGGCACCTGCATGGTTATTGGAGATGGAATTCTTACCCCGGCTATATCAGTTTTATCAGCCGTTGGTGGCATCAAGGTAAATCAGCCCGACATGAATAGCAGTGTAGTAGTTCTCGTTGCTGTTGTAATATTAGTTGGATTTTTCAGTTTGCAACATTATGGAACAGACAGAGTTAGTTGGCTCTTTGCTCCAATTGTTCTCCTTTGGTTTCTCCTAATAGGAGGTATCGGTATATTTAACATCTGGAAGCATGGAAGCAGAGTTCTAAAAGCTTTTTCTCCTGTGTATATATATCACTATTTCAAAAGAGGCGGAAAAAAAGGATGGACTTCCCTTGGTGGTATCATGCTCAGTATAACAGGGACGGAGGCTCTTTTTGCCGACCTAGCTCATTTTCCAGTCTCAGCTGTACAACTTGCATTTACTCTAGTAGTGTTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGCTGCATACCTTATGAATAACATGGCTCATTCACAAGACTCCTTTTATCGTTCTATTCCAGAAAGTATATACTGGCCGGTATTTGTTGTTGCAACAGCTGCAGCTATAGTTGCGAGCCAGGCGACAATAACTGCAACTTTTTCGATTGTTAAGCAAGCCCTTGCTCATGGTTGTTTCCCTAGAGTTAAAGTTGTATATACATCAAGAAAATTTGCTGGCCAGATATATATTCCAGATATTAATTGGGTTCTTATGGTTCTTTGCATTGCCGTCACAGCTGGTTTTGAAAATCAAAACCAGATTGGAAATGCTTACGGTACTGCAGTTGTAATTGTCATGCTCGTTACGACATTCCTTATGATTTTAATCATGATATTAGTGTGGCGCTGCCACTGGATTCTTGTACTCACCTTCACTTGCTTATCGTTGATTGTGGAATTCTCATACTTCTTCTCTGTAATCTTCAAAGTTGATCAAGGTGGATGGGTTCCACTTGTAATTGCGGGAGCATTTCTTGTTATAATGTATGTCTGGCATTACGGTACGCTGAAACGCTACGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTCGGACTCGGCCCAAGTTTAGGACTCGTTCGTGTACCCGGAATCGGACTAGTCTACACAGAACTTGCAAGTGGAGTACCGCCGATATTTTCTCATTTCATCACCAACCTACCAGCCATCCATTCCGTCGTTGTTTTCGTATGCGTCAAATACCTTCCTGTCTACACCGTCCCTGAGGAAGAGAGATTCCTTGTCAAAAGAATCGGGCCAAAGAATTACCACATCTTCCGATGTGTTGCTCGATATGGCTATAAAGACCTTCACAAGAAAGACGACGAGTTTGAGAAAAAACTCTTCGATAACCTTTCGATGTTTGTTAAGCTTGAATCCATGATGGAAGGTTGTTCAGATTCAGACGAATACAGTTTATATGGACAAGAAAAAGAGTTGTTGCCAAGAGATGGCTTGTTGAATAACAACGGGAGCACGTTTTCTTCGAATGTGGAGTTCACAATCAACTCAATTGATTCAATAGTACAAGTTAAATCACCGCCGCCACATGTGAGTAATAATACGGTTAGGTCCTCCGGTCAAGTGAGCAGCCAAACCGAGATCGATGAAGTTGAGTTTTTAAATAACTGCAGGGACGCAGGGGTGGTTCACATATTGGGAAACACAGTTGTAATAGCAAGGAGAGATTCAAATTTCTTCAAGAAATTAGCTGTTGATTATATATATGCATTTCTTAGGAAGATTTGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGATTTTCTCTGTATAG 2346 0.4066 MGTRVESDEDGDNKGSMWELDQKLDQPMDEEAGRLRNMYKEKSLGVVYGDLGTSPLYVFYNTFPNGVKDEDEVLGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEERESWKSAILILVLAGTCMVIGDGILTPAISVLSAVGGIKVNQPDMNSSVVVLVAVVILVGFFSLQHYGTDRVSWLFAPIVLLWFLLIGGIGIFNIWKHGSRVLKAFSPVYIYHYFKRGGKKGWTSLGGIMLSITGTEALFADLAHFPVSAVQLAFTLVVFPCLLLAYSGQAAYLMNNMAHSQDSFYRSIPESIYWPVFVVATAAAIVASQATITATFSIVKQALAHGCFPRVKVVYTSRKFAGQIYIPDINWVLMVLCIAVTAGFENQNQIGNAYGTAVVIVMLVTTFLMILIMILVWRCHWILVLTFTCLSLIVEFSYFFSVIFKVDQGGWVPLVIAGAFLVIMYVWHYGTLKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPPIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNYHIFRCVARYGYKDLHKKDDEFEKKLFDNLSMFVKLESMMEGCSDSDEYSLYGQEKELLPRDGLLNNNGSTFSSNVEFTINSIDSIVQVKSPPPHVSNNTVRSSGQVSSQTEIDEVEFLNNCRDAGVVHILGNTVVIARRDSNFFKKLAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFSV 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01973 781 MobiDBLite consensus disorder prediction 1 20 - -
Vifa6g01973 781 Pfam K+ potassium transporter 42 611 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa6g01973 781 NCBIfam potassium uptake protein 42 779 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vifa6g01973 781 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 42 778 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01973 Vifa-Chr6 729913657 729918328 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01973 1 781 Inorganic Solute Cotransporters AT2G35060 74.595 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01973 K03549 - gmx:100794454 1337.78