Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01948 ATGCAAAATGGTGGTATTCTTCCTTCAATTCCAAATCAACAAAGCAACTCATACATCGGAAATGTACCTCTTATCTCAAATTCACACCATAACCCAAATTTTCAAAACTCTCATTTTATCCCAAATTCACAAAATAATCCACACTTTGGAAATTACTCATATCATACTCCACCTTATCCATATCAATATCAACAACTTACATTTCAACCAACTAACCCCACTATTCCTCATGTGGCTCAAATAGGCAGTAGTGGTGTGCAATCAAATGATCAAGAACATGAAACACAACAATTTTGCATTCAAGGTAGCGTAGAAACTATTAACCTTGGTGAAGAAGTTGCATCTGCACCAGTTGCGAAAACGCCTAAACAAAGGTTCCAACAAAAAGAGGATGAAGTTCTCATTCAATCATGGCTCAACGTTTCAAAGGAGTCAATTGTTGAGGTTGATCAAAAAGGAGATAGTTTTTGGAACAGGATTGGCGAAGCTTACAACAGGCATCGTGACACCAATTACAAAGAGAGGAAACCGATGGCACTTAAAGGTCGATGGCACAAAATTAATCCATTTGTTCAAAAGTTTGTTGGATGCTACAAACAAGCTGTGTCTACACAACAAAGTGAGAGCTCCGAGAGCAATATCATGCAAGCTGCATATAAAATTTATTTTCAAGATGAAGGTGAAAAGTTTATATTTAAGGCTGCATGGAGATTATTGAAAGATGAACCTAAATGGCTCGCGGGTTCATCGGAAGCTTCTACAAAAAGAACAAAGAATTCAGCTTCAGGAGCATATTCTTCATCTTCTAATCCACCGACACCAACGAGTAGCGGATACAATCCACCATCGCCTACTTTGTCACGTCGTCCAATCGGTCAAAAGGCAGCCAAAAGGAAAGAGAAGGAAAAGTTTATGGAAATGTCAACTACTCCCAATGGTGAAAAAGTTGAGATAGAAAGAAAAAAGGTTGATGCAAAGATTAAGAAGGCTGAGAGTGCGGAGGAAAGATTGAAGATGAATGATCTGCAAATACTCTCCAAAGATACATCAAATATGGATACACGAAAACTACAAGCTCATGAAATATTGTGCGACATGATTAGAGAAAAATATGGAATTAATTAG 1125 0.3769 MQNGGILPSIPNQQSNSYIGNVPLISNSHHNPNFQNSHFIPNSQNNPHFGNYSYHTPPYPYQYQQLTFQPTNPTIPHVAQIGSSGVQSNDQEHETQQFCIQGSVETINLGEEVASAPVAKTPKQRFQQKEDEVLIQSWLNVSKESIVEVDQKGDSFWNRIGEAYNRHRDTNYKERKPMALKGRWHKINPFVQKFVGCYKQAVSTQQSESSESNIMQAAYKIYFQDEGEKFIFKAAWRLLKDEPKWLAGSSEASTKRTKNSASGAYSSSSNPPTPTSSGYNPPSPTLSRRPIGQKAAKRKEKEKFMEMSTTPNGEKVEIERKKVDAKIKKAESAEERLKMNDLQILSKDTSNMDTRKLQAHEILCDMIREKYGIN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01948 374 PANTHER - 101 370 - -
Vifa6g01948 374 Pfam No apical meristem-associated C-terminal domain 229 354 IPR029466 -
Vifa6g01948 374 MobiDBLite consensus disorder prediction 250 287 - -
Vifa6g01948 374 Coils Coil 316 340 - -
Vifa6g01948 374 MobiDBLite consensus disorder prediction 247 312 - -
Vifa6g01948 374 MobiDBLite consensus disorder prediction 293 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01948 Vifa-Chr6 724072484 724073690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01948 120 302 Glutathione S-transferase Gene Family AT5G41240 36.788 7.67e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01948 - - mtr:11446189 325.865