Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01941 ATGGGAATATTTTCCTTTTTCTGCTACTCTCTCTTTTACCTTTCAACATTTTTCATCTTCAAGCTTTTCCTCCGATCAAGAAAATTCAAAAACCTACCACCAGGCCCAACTTCAGTTCCCATAATCGGCAACCTTCACCATCTCAAACGCCCTCTCCACCGCACCTTCAAATCACTCACCGACCAATACGGCAAAGTCATTTCCCTTTGGTTTGGATCACGTCTTGTCGTCGTTGTTTCATCCCTCTCTGAATTCCAACAATGTTTCACAAAAAACGACATCGTCTTAGCAAATAGACCGCGTTTTTTATCAGGAAAATATATCTTCTACAATTACACCACCTTAGGTTCCTCCTCCTACGGTGAACACTGGCGCAACCTCCGCCGTATAACTTCCCTCGACGTCCTTTCAAATCACCGTATCAACAGCTTCGCTGGAATCAGACGAGACGAGACCAAGAGATTGATAGCCAAGTTGGCTGAGGATTCATCGTCTGATTTTGCGGAAGTAGAACTCACTTTCAGATTCTTTGATATGACTTTCAACAATATCATGAGAATGATCTCTGGAAAGAGGTACTATGGAGAAGATTGTGACGTGTCTGATCTTCAAGAAGCAAGTGAGTTTAGGGATATGGTTTCTCAACTTTTGCAGTTATCCGGAGCAAATAATAAGACTGATTTTTTGCCCTTGCTTAAGTTTCTTGATTTTGAAAAGTTGGAGAAGAGAGTCAAACATATTGGTGAAAGATGTGATAAGTTCTTGAGAGGACTCCTTGAAGAACAACGCAACAAGAAGGAACATACGAATACTATGATAGATCATCTTCTAAATATGCAAGAATCACAACCAGAATACTACACAGATCAAATCATCAAAGGCCTCGCTTTGGCCATGCTCCTTGCTGGAACCGACTCATCTGCTGTAACCTTAGAATGGTCAATGTCTAATATTTTGAACCATTCCGAGGTATTGAAGAAGGTAAGAGAAGAATTGGATACTCATGTAGGTCAAGACCGTTTGGTGGATGAATCAGATCTTCAAAAACTCACTTACCTCAAAAATGTTATCTACGAGACGCTTCGGTTGTACACTCCTGCTCCCTTGTTACTACCACACTCGACTATAGAAGAGTGCAACATTGGAGGATACAAAGTACCGGGAGACACCATAGTATTGATCAATGCTTGGGCCCTTCATAGAGACCCTGAGATTTGGAGTGAAGCAACGAGTTTCAAGCCTGAGAGGTTTGAGAAAGAAGGAGAGTTAGAGAAGTTGATTGCATTTGGAATGGGAAGAAGGGCTTGTCCTGGAGAAGCCTTGGCTCTTAGAGCCATTAGTATGACTTTGGCATTATTGGTTCAATGCTTTGATTGGAAACTTACAAGTCATGATGACAAGATTGATATGTCAGAAAGAGATGGGTTCACTTTGGCAAAGTTAGTACCATTGAAGGCCATGTGTAAAACTCGTCCTATCATCAACAAGGTTTTCAAGTAA 1500 0.4133 MGIFSFFCYSLFYLSTFFIFKLFLRSRKFKNLPPGPTSVPIIGNLHHLKRPLHRTFKSLTDQYGKVISLWFGSRLVVVVSSLSEFQQCFTKNDIVLANRPRFLSGKYIFYNYTTLGSSSYGEHWRNLRRITSLDVLSNHRINSFAGIRRDETKRLIAKLAEDSSSDFAEVELTFRFFDMTFNNIMRMISGKRYYGEDCDVSDLQEASEFRDMVSQLLQLSGANNKTDFLPLLKFLDFEKLEKRVKHIGERCDKFLRGLLEEQRNKKEHTNTMIDHLLNMQESQPEYYTDQIIKGLALAMLLAGTDSSAVTLEWSMSNILNHSEVLKKVREELDTHVGQDRLVDESDLQKLTYLKNVIYETLRLYTPAPLLLPHSTIEECNIGGYKVPGDTIVLINAWALHRDPEIWSEATSFKPERFEKEGELEKLIAFGMGRRACPGEALALRAISMTLALLVQCFDWKLTSHDDKIDMSERDGFTLAKLVPLKAMCKTRPIINKVFK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01941 499 Pfam Cytochrome P450 33 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 FunFam Cytochrome P450 family protein 23 494 - -
Vifa6g01941 499 SUPERFAMILY Cytochrome P450 33 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PANTHER CYTOCHROME P450 82C3-RELATED 15 491 - -
Vifa6g01941 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vifa6g01941 499 CDD CYP81 64 484 - -
Vifa6g01941 499 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 Gene3D Cytochrome P450 21 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01941 499 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01941 Vifa-Chr6 721286417 721288027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01941 3 498 Cytochrome P450 AT4G37370 52.096 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01941 K13260 - ag:BAA22422 834.328