Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01906 ATGGACCTCTTGTTAACGGAAGAATCACTGGCTGCGTACAGAATCATGGAGGACCAACTACCGCTTTCCTCTCCCCTTTCTGCTTCTGCTCCTGCTCCTTCTCCACCTTCAGAGAACCACCTTTCAAATCCTTCCGATGCAGTTCTTTTCTTCGGTCTCAGTCTTGCTCTTGGAATCGCTTGCAGACACCTTTTGCGTGGGACCAGAGTTCCTTACACTGTTGCTTTGCTCATCCTTGGCATTGCACTTGGAGCATTAGAATATGGTACTCATCATCGGCTGGGAAAGATTGGGGACGGAATTCGTCTTTGGTCGGAGATTGATCCAGAGCTTCTGTTGGCTGTTTTTCTTCCCGCTCTCCTTTTCGAGAGCTCATTCTCAATGGAAGTTCACCAAATTAAGAGGTGTATAGCACAAATGATCTTACTAGCTGGTCCAGGTGTTGTGATTTCGACCATTTTTCTTGGAGCTGTTTTGAAGCTTACTTTTCCATATGACTGGAGTTGGAAAACATCACTGTTGCTTGGGGGACTTCTGAGTGCAACTGATCCTGTTGCGGTTGTGGCCTTGTTGAAAGACCTTGGTGCCAGCAAAAAATTAAGCACGATAATTGAAGGGGAATCCTTGATGAATGATGGGACGGCTATTGTGGTTTATACCCTTTTCTATCGGATGGTTCTTGGAGAGACCTTCAACTGGGTTGCCATAATCAAATTTCTAGCAACAGTTTCACTTGGAGCTGTAGGAATTGGCCTTGCTTTCGGGATTGCATCTGTTTTATGGCTTGGGTTTATTTTTAATGATATAGTGATTGAGATTTCTCTAACACTTGCTGTTAGCTACATTGCTTACTACACTGCACAAGAGAGTGCGGATGTTTCTGGTGTTTTGACAGTGATGTCATTGGGAATGTTCTATTCTGCCTTTGCAAGGACAGCTTTTAAGGGTGAAAGTCAACAAAGCTTACATCACTTTTGGGAAATGATTGCTTATATTGCTAATACATTAATTTTCATTTTGAGTGGAGTTGTTATAGCTGAAGGAATACTTAGTGAAGACAAAGTTTTCTATCATGGAAAATCATGGGTCTATCTCATACTTCTCTATATATATGTTCAAGTGTCTCGATGCATTGTAGTTGGAGCATTATTTCCCTTTCTAAGATACTTTGGATATGGTTTGGATTGGAAAGAAGCTATTATTCTTGTCTGGTCAGGGTTACGGGGAGCAGTTGCGCTGTCACTTTCACTATCGGTTAAGCGTTCGAGTGGAAGATCAGTTGAATTGACTCCAGAGACGGGAACAATGTTTGTTTTCTTCACCGGTGGAATTGTGTTTTTAACACTTATAGTAAATGGTTCAACCACACAGTTCATATTACACTTCCTTGGCATGAATAAGTTATCATCAGCTAAGAGACGTATCCTTGAGTTTACAAAGTATGAAATGGTTAACAAAGCATTAGAGGCTTTTGGTGAACTTGGAGATGATGAGGAACTCGGGCCAGCTGACTGGCCCACAGTGAAGAGATATATTTCATGCTTAAATGACATTGAAGGTGAACGTGTTCATCCGCATGGTGCATCTGAAAGTGATGGTAACTTAGATCCTATGAATTTGAAAGACATACGAGTACGCCTTCTGAATGGTGTCCAAGCTGCGTACTGGGAAATGCTTGATGAAGGGAGAATCACCCAAACAACAGCTAATATCCTAATGCTGTCAGTGGAGGAATCAATAGATTTGGCTTCATCTGAGCCTCTATGTGACTGGAAAGGTTTAAAAGCTAATGTTCACTTCCCAAATTACTACAAGTTCCTCCAGTCAAGTATGTTCCCACCTAAATTAGTTACATACTTCACTGTGGAAAGGTTGGAGTCCGCATGTTATATTTGTGCTGCATTTCTTCGTGCCCACAAGATTGCCCGGCAACAATTACACGAGTTCATAGGTGACAGTGACGTTGCTTCTGCTGTCATCGATGAAAGTGTTGTGGAGGGAGAAGAAGCACGGAAGTTCCTAGAAGATGTTAATTTAACATACCCACAGGTTTTACGTGTTGTAAAGACAAGGCAAGCAACATATGTAGTGCTAAATCATTTGCTTGAATATGTTCAAAACCTTGAGAAGGCTGGGATATTGGAAGAGAAAGAGATGCTACATCTTCATGATGCTGTCCAGACTGATTTAAAGAAATTGCTCAGAAACCCTCCTTTGATTAAGCTGCCTAAAATAAGTAATATACATCCTATGTTGGATGCTCTGCCATCTTCAGTCCGTGGACCACTTGTAAGCGGTACAAATGAAACAATGAAATTGCGTGGCTTGACCCTTTATAAAGAAGGTGCCAAATCGAATGGTATTTGGTTAATTTCTAATGGAGTGGTTAAGTTAGAAAGCAAGACGATTCAAAGCAAGCACCCATTTTATCCAACTTTTACTCATGGGAGCACATTGGGTCTTTATGAAGTGCTGAGTGGAAGAACGTATATTTGTAATGTTGTGGCAGACTCAGTCGTATTCTGCCTTTTTGTTGAAGCAAGTAAGATAATTTCATGTCTCAAATCCGACCCTTCAATGGAAGACTTCCTGTGGCAGGAAAGTGCTATTTTCCTTTCCAAACTATTGCTTCCTCAGATATTTGAGAAACTAACGGTGAAAGATTTAAGAGCTCTCATTGCGGAAAGATCTGAAATGACCATGTATATAAGAGGGGAAACAATTGAAATCCCTTATCATTCAGTTGCTTTCTTACTAGAAGGATATGTCAAAACCCAAGGTTGTCAAGAACTGGTCACCGCACCAGTGGCTCTGGTTCCTTCGCATGGGAATCGAAGCTTCCAAAATTTGTCAGTGTCAGGTACCAAGGAAGCTAGTTTTATTCATCAAGGATCTTATTATCTGGTTGAAACTAGAGCAAGGGTAATTGTGTTTGACATCGCTGCATTTGAGACTGATGCTGCTCTTGTTAAAAAGTCAAGTTCACGGTTATCACATGTCTCGGATCATCCTCATAGATCTTTCCGCATAGAACATAGTGGTCTTATGAGTTGGCCTGAACATTTCTACAATCAGAATCAGCATAAGCTGAGATCTGAACAACAAACCAATAGTTTGTCTGCAAGGGCAATGCAGCTGAGCATATATGGAAGCATGGTGGACGTCCCTCCCCCGGGTAGAAGTTTGTCAACCAATCGCACTAGACCATCGCTTCAAAGTTTGTCATATCCAACCATTGTGCCACATCAAGGTCGTCGTCCACTTGTTTCAGCCAAATCAGAAGGAGCAGCAACTGACAAAAAGAACATTGGAATGAAGTGGATCACGCAACATGTTACAAACCTCCCTTCACAAAGCACAGATCGGAGAGTACAGCATGAAGATGATTCAAGTGATGATTCTGCTGTTGAAGAAGATATTATTGTGCGGATTGATTCACCAAGCACGCTATCTTTTCGCCAGTCTTGA 3468 0.4164 MDLLLTEESLAAYRIMEDQLPLSSPLSASAPAPSPPSENHLSNPSDAVLFFGLSLALGIACRHLLRGTRVPYTVALLILGIALGALEYGTHHRLGKIGDGIRLWSEIDPELLLAVFLPALLFESSFSMEVHQIKRCIAQMILLAGPGVVISTIFLGAVLKLTFPYDWSWKTSLLLGGLLSATDPVAVVALLKDLGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGETFNWVAIIKFLATVSLGAVGIGLAFGIASVLWLGFIFNDIVIEISLTLAVSYIAYYTAQESADVSGVLTVMSLGMFYSAFARTAFKGESQQSLHHFWEMIAYIANTLIFILSGVVIAEGILSEDKVFYHGKSWVYLILLYIYVQVSRCIVVGALFPFLRYFGYGLDWKEAIILVWSGLRGAVALSLSLSVKRSSGRSVELTPETGTMFVFFTGGIVFLTLIVNGSTTQFILHFLGMNKLSSAKRRILEFTKYEMVNKALEAFGELGDDEELGPADWPTVKRYISCLNDIEGERVHPHGASESDGNLDPMNLKDIRVRLLNGVQAAYWEMLDEGRITQTTANILMLSVEESIDLASSEPLCDWKGLKANVHFPNYYKFLQSSMFPPKLVTYFTVERLESACYICAAFLRAHKIARQQLHEFIGDSDVASAVIDESVVEGEEARKFLEDVNLTYPQVLRVVKTRQATYVVLNHLLEYVQNLEKAGILEEKEMLHLHDAVQTDLKKLLRNPPLIKLPKISNIHPMLDALPSSVRGPLVSGTNETMKLRGLTLYKEGAKSNGIWLISNGVVKLESKTIQSKHPFYPTFTHGSTLGLYEVLSGRTYICNVVADSVVFCLFVEASKIISCLKSDPSMEDFLWQESAIFLSKLLLPQIFEKLTVKDLRALIAERSEMTMYIRGETIEIPYHSVAFLLEGYVKTQGCQELVTAPVALVPSHGNRSFQNLSVSGTKEASFIHQGSYYLVETRARVIVFDIAAFETDAALVKKSSSRLSHVSDHPHRSFRIEHSGLMSWPEHFYNQNQHKLRSEQQTNSLSARAMQLSIYGSMVDVPPPGRSLSTNRTRPSLQSLSYPTIVPHQGRRPLVSAKSEGAATDKKNIGMKWITQHVTNLPSQSTDRRVQHEDDSSDDSAVEEDIIVRIDSPSTLSFRQS 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01906 1155 PANTHER SODIUM/HYDROGEN EXCHANGER 38 812 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vifa6g01906 1155 Gene3D Jelly Rolls 767 876 IPR014710 -
Vifa6g01906 1155 MobiDBLite consensus disorder prediction 1115 1140 - -
Vifa6g01906 1155 ProSiteProfiles cAMP/cGMP binding motif profile. 751 846 IPR000595 -
Vifa6g01906 1155 MobiDBLite consensus disorder prediction 1121 1140 - -
Vifa6g01906 1155 Gene3D - 168 220 - -
Vifa6g01906 1155 Pfam Sodium/hydrogen exchanger family 51 460 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa6g01906 1155 SUPERFAMILY cAMP-binding domain-like 749 865 IPR018490 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01906 44 1154 Antiporters AT2G01980 64.508 0.0 1404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01906 K14726 - gmx:100789429 1841.62