Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01833 ATGGAGAAGGAAAGAGACACTCAGGTTTACATGGCCAAGCTTTCCGAACAGGCCGAGCGATACGAAGAAATGGTTGAGTGCATGAAGACAGTAGCAAAGCTTGACGTTGAGTTAACTGTGGAAGAGAGGAACCTTCTGTCGGTGGGATATAAAAATGTCATTGGTGCACGGAGAGCCTCTTGGCGTATTATGTCTTCAATTGAACAAAAAGAGGAGTCTAAGGGAAACGAGAACAACGTGAAAGTGATCAAGAGTTATTGCCAAAAGGTTGAGGAGGAACTATCCAAAATTTGCAGTGACATTCTCACAATTATTGACCAACATCTCATTCCTTCTTCCACCACAGGAGAAGCTACCGTTTTCTACTATAAGATGAAAGGTGACTATTTTCGATATCTTGCTGAGTTCAAATCCGATCAAGATAGGAAGGAGGCAGCTGAGCAGTCACTCAAGGCTTATGAGGCTGCTTCAGCCACTGCAAGCACGGATCTTCCATCAACACATCCAATCCGTCTTGGTCTTTGCACTCAACTTCTCTATACCTTGAGTGAAGAGTCATACAAGGACAGTACTTTGATCATGCAGTTGTTGAGAGACAACCTTACTCTTTGGACCTCCGATTTACCCGAGGATGGAGGTGATGAATTCAAATCAGAAGATGCCAAACTCATTTGA 675 0.4356 MEKERDTQVYMAKLSEQAERYEEMVECMKTVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKVIKSYCQKVEEELSKICSDILTIIDQHLIPSSTTGEATVFYYKMKGDYFRYLAEFKSDQDRKEAAEQSLKAYEAASATASTDLPSTHPIRLGLCTQLLYTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDEFKSEDAKLI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01833 224 SMART 1433_4 5 218 IPR023410 -
Vifa6g01833 224 Pfam 14-3-3 protein 179 205 IPR023410 -
Vifa6g01833 224 Pfam 14-3-3 protein 11 175 IPR023410 -
Vifa6g01833 224 Coils Coil 11 31 - -
Vifa6g01833 224 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Vifa6g01833 224 ProSitePatterns 14-3-3 proteins signature 2. 187 206 IPR023409 -
Vifa6g01833 224 Gene3D - 1 177 IPR036815 -
Vifa6g01833 224 Coils Coil 136 156 - -
Vifa6g01833 224 SUPERFAMILY 14-3-3 protein 4 207 IPR036815 -
Vifa6g01833 224 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Vifa6g01833 224 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Vifa6g01833 224 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Vifa6g01833 224 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Vifa6g01833 224 PANTHER 14-3-3 PROTEIN 179 207 IPR000308 -
Vifa6g01833 224 PIRSF 14-3-3 175 217 IPR000308 -
Vifa6g01833 224 PIRSF 14-3-3 1 179 IPR000308 -
Vifa6g01833 224 Gene3D - 178 220 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01833 Vifa-Chr6 691714131 691715467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01833 2 222 14-3-3 family AT1G26480 72.400 1.36e-126 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01833 K06630 - gmx:100798385 377.481