Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01779 ATGGCCACCTTCATTTTCAGGTCTAACAAAATGGTCCATGCCTTGACCTGGTTTTGTCTCATGCTAATGATTCATAAGGGTGCGGCTTATGAGTTCATAGTTGGTGGCCAAAAGGGTTGGAGTGTTCCAAGTGATTCCAGTTACAATCCTTTCAATCAATGGGCTGAAAAGAGCCGTTTTCAAGTAGGAGACTCTCTAGTGTTCAACTACCAATCTGGCAAAGATTCAGTGCTATATGTAAAGAGTGATGACTATGCAAGTTGCAATGTTGGTTCACCTTATGCAAAATACTCTGATGGTCACACAGTCATCAAACTCAACCAATCAGGACCTCATTTCTTCATCAGTGGAAACAAAGACAACTGTGCCAAAAATGAGAAAATAACAGTCATTGTTCTGTCGGACAGAAGCAACAGCAACAGCGGCGGTTCATCAAACACAAACCAAACAAGCAATGCTTCTCCACCTTCACCACAATCATCATCATCACCTCCTTCACCATCTCCTTCTAAGCCAGATGATCAATCTCCATCTCCAGATACAAACCAAACACCATCTACTAGTGATCATGGTCATCCTCCTCGCAACGGTGCTGCTTCAGTCTTTGTCAACCTAGCTGGTTCTGTTGGAACACTCATGGCTTCTGTTCTTATTTTATCTAAGTATTGA 669 0.4245 MATFIFRSNKMVHALTWFCLMLMIHKGAAYEFIVGGQKGWSVPSDSSYNPFNQWAEKSRFQVGDSLVFNYQSGKDSVLYVKSDDYASCNVGSPYAKYSDGHTVIKLNQSGPHFFISGNKDNCAKNEKITVIVLSDRSNSNSGGSSNTNQTSNASPPSPQSSSSPPSPSPSKPDDQSPSPDTNQTPSTSDHGHPPRNGAASVFVNLAGSVGTLMASVLILSKY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01779 222 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Vifa6g01779 222 CDD OsENODL1_like 30 133 IPR041846 -
Vifa6g01779 222 FunFam Early nodulin-like protein 9 30 144 - -
Vifa6g01779 222 PANTHER BLUE COPPER PROTEIN 29 153 IPR039391 GO:0009055
Vifa6g01779 222 MobiDBLite consensus disorder prediction 158 174 - -
Vifa6g01779 222 MobiDBLite consensus disorder prediction 175 193 - -
Vifa6g01779 222 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Vifa6g01779 222 Gene3D - 30 146 IPR008972 -
Vifa6g01779 222 MobiDBLite consensus disorder prediction 134 199 - -
Vifa6g01779 222 MobiDBLite consensus disorder prediction 134 157 - -
Vifa6g01779 222 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01779 Vifa-Chr6 677278839 677279708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01779 11 174 Phytocyanin Superfamily AT3G20570 49.412 2.20e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01779 - - gmx:100792916 294.278