Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01769 ATGCATAATTTGTTGGAAGAACTAGGCAGAAATATTGTTGCAGAAAACATAAGCAAAGATCCCATAAAGTGGAGAAGGGTGTGGTTCGACAAACAATTCTACGATGTTAGGTTGGAAAATATGAATGTTGAAGCCATAGTTTTGGATCAGGAATATGAAGATATGGATGCCGTGATATTCAAAGACTTTTCAAATCTTAGATTGCTCATCATCAAGTATGTGAAAGTATCGGGAAGCCTCAATCGTCTTTCTAACGAATTGAGATATATTGAGTGGAGTGAATATCCTTTCATGTATTTGCCATCAAGTTTGTTCTAA 318 0.3553 MHNLLEELGRNIVAENISKDPIKWRRVWFDKQFYDVRLENMNVEAIVLDQEYEDMDAVIFKDFSNLRLLIIKYVKVSGSLNRLSNELRYIEWSEYPFMYLPSSLF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01769 105 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 103 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01769 Vifa-Chr6 673974405 673974832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01769 1 101 WRKY Transcription Factor Family AT5G45050 26.357 5.85e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01769 - - mtr:25497393 112.849