Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01762 ATGGTCACCAAAATTCATAACCAGCTTCCATTATCAATCTCACCCACATCTCCAATCCCTTCCAAGTTTCGGGATTTTGTGGGAGGTAACCACTATCTAGAAACAATGGTGGAGACTCCGGTTAATGGGAGAATAAGGCAAGCTTTTACGGTTGTAAACGGCCTAACTAGTACTCCTCCAAGCATTGCTGGATCAGATTGTGGTATTATAGAGTTCACAAGAGAGGATGTTGAGGCATTGCTAAATGAAAAAGCCAAAAAGAAAGAGAGGTTTAATTATAAGGAAAGATGTGAAAATATGGTGGATTATATAAAAAGGCTTAAGGTTTGTACTAGATGGTTCCAAGACATTGAGATGAGCTACTCGATAGAGCAGGAAAAGTTAAAGAATTCGTTGGAAATGACCCAACAAAAGAGTGTACAAATCGAGTTGCTGCTTAAAATCAAGGAAGAGGAAATGAACTTAATTATTACAGAAATGAGAAAGAATTGCACTTCCTTACAAGAGAAATTGATAAAGGAAGAAGTAGAGAAGTCGGCTGCAGTGGATTCTCTTGTTAAAGAGAGAGAAGCAAGGCTTGATATTGAGAGGTCACATACCACTCTTTCTGAGGACATTGGAAAAGCTCAACGAGAGATTCAAAGTGCGAATCAGAAGATATCATCACTCAATGAGATGTATAAGCGGTTACAAGAATATATAACGAGTTTACAACAGTACAATGGAAAACTTCATACGGAGCTTTCATCAGTTGAAGATGAACTTAAACGCGTAGAGAAAGAGAAGGCTTCTGCAATGGAGAACATCGCTATGTTAAGTGCTCAACTTACTTTATCCATTTCTTCTCAAGAAGAAGCCACAAAACAGAAGGACGATCTTGCTGGTGAAGTTGCTTCACTTAGAGGAGAGTTGCATCAAGTAAGAGATGATAGAGACCGTCGATTATCTCAAGCAGAAACTTTAAATGCTGATTTGATGAGATTAAAAGAATCTAGGGAAAACTCCTGCATTGAATTGGACAGCTTGACGTTAAAAGCGAATGAACTGGAGGAAAAAAGTTCTCTGAAAGAGAATCAAATAAAGACATTGCAAGAACAGTTAGCAACTGCAGAGAAGAAACTGCAGGTGTCTGATATATCTGTATTCGAGACAAGGACAGAATTTGTAGGGAAACAAAAACTTGTTGATGAGTTACAAAGAAGCTTGGAAGATGCAGAATATAAACTTATAGAAGGGGAGAGGTTGCGCAAAAAATTACACAATACCATTTTGGAGCTAAAAGGGAACATCCGTGTATTCTGTCGGGTGAGGCCTTTGTTACACGATGAAAGTCGTAGCACAGAAGACAAGATATTCAGTTATCCAACACCGATGGAAGCTTCAGGACGACAAATTGACGTAGCCCAAAATGGCCAGAAACATTCTTTCACATTTGATAAAGTTTTTATACCAGAAGTATCACAGGAAGAAGTTTTTGTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGTCAAACCGGATCAGGGAAAACCTATACAATGATGGGAAGACCTGGACATCCGGAGGAAAAGGGATTGATACCTCGTTCGTTAGAACAAATATTTCAAACCAAACAGTCTCAGCAACCTCAAGGCTGGAAATACGAAATGCAGGTGTCAATGTTGGAAATATACAACGAAACTGTTCGTGATCTGATGTCGACAAACAGATCGTCATCGGAAAATGGCACTCCTGGAAAGCAATATACAATCAAACATGATGCAAGTGGAAATACACAAGTTTCCGATCTTACAGTAGTGGATGTTCACAGTGCGAAAGAAGTCGCATTTCTATTAAATCAAGCTGCAAATAGCAGATCTGTGGGAAAGACTCAGATGAATGAACAATCATCAAGAAGCCACTTCGTGTTTACTCTTCGAATATGCGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAATCTAATTGACCTTGCTGGTAGCGAGCGTCTCTCGAAGAGTGGTTCAACCGGGGATCGGTTGAAAGAAACTCAAGCAATCAACAGAAGCTTGTCATCATTGAGTGATGTCATATTTGCCTTGGCCAAGAAGGAAGATCATGTGCCATTCAGAAACTCAAAGCTTACATATCTACTTCAACCTTGTCTCGGTGGAGACTCGAAGACGTTAATGTTTGTAAACATCTCACCCGATACTTCTTCGGTTAGCGAGTCACTATGCTCACTCAGGTTTGCTTCAAGAGTCAATGCTTGTGAGATTGGAACGCCTCGTCGCCAGACCAATGGCCGTGCGACAGACTCTCGTTTGAGCTATTTCTAA 2358 0.4008 MVTKIHNQLPLSISPTSPIPSKFRDFVGGNHYLETMVETPVNGRIRQAFTVVNGLTSTPPSIAGSDCGIIEFTREDVEALLNEKAKKKERFNYKERCENMVDYIKRLKVCTRWFQDIEMSYSIEQEKLKNSLEMTQQKSVQIELLLKIKEEEMNLIITEMRKNCTSLQEKLIKEEVEKSAAVDSLVKEREARLDIERSHTTLSEDIGKAQREIQSANQKISSLNEMYKRLQEYITSLQQYNGKLHTELSSVEDELKRVEKEKASAMENIAMLSAQLTLSISSQEEATKQKDDLAGEVASLRGELHQVRDDRDRRLSQAETLNADLMRLKESRENSCIELDSLTLKANELEEKSSLKENQIKTLQEQLATAEKKLQVSDISVFETRTEFVGKQKLVDELQRSLEDAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLHDESRSTEDKIFSYPTPMEASGRQIDVAQNGQKHSFTFDKVFIPEVSQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETVRDLMSTNRSSSENGTPGKQYTIKHDASGNTQVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRICGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINRSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDTSSVSESLCSLRFASRVNACEIGTPRRQTNGRATDSRLSYF 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01762 785 ProSitePatterns Kinesin motor domain signature. 664 675 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vifa6g01762 785 Pfam Kinesin motor domain 435 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa6g01762 785 Coils Coil 241 275 - -
Vifa6g01762 785 Coils Coil 395 415 - -
Vifa6g01762 785 CDD KISc_C_terminal 427 766 - -
Vifa6g01762 785 ProSiteProfiles Kinesin motor domain profile. 429 764 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa6g01762 785 Gene3D Kinesin motor domain 373 766 IPR036961 -
Vifa6g01762 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 762 IPR027417 -
Vifa6g01762 785 Coils Coil 332 380 - -
Vifa6g01762 785 FunFam Kinesin-like protein 375 766 - -
Vifa6g01762 785 Coils Coil 283 310 - -
Vifa6g01762 785 Coils Coil 199 233 - -
Vifa6g01762 785 Coils Coil 70 90 - -
Vifa6g01762 785 PANTHER KINESIN-LIKE PROTEIN KLP-3 265 771 IPR027640 GO:0003777|GO:0007018
Vifa6g01762 785 PRINTS Kinesin heavy chain signature 505 526 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa6g01762 785 PRINTS Kinesin heavy chain signature 665 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa6g01762 785 PRINTS Kinesin heavy chain signature 714 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa6g01762 785 PRINTS Kinesin heavy chain signature 634 651 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa6g01762 785 Coils Coil 157 177 - -
Vifa6g01762 785 SMART kinesin_4 427 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01762 Vifa-Chr6 673097821 673101903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01762 107 761 Calmodulin-binding Proteins AT5G65930 33.034 1.41e-78 274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02656 1 417949901 417954129 Vifa6g01762 6 673097821 673101903 PCT