Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01737 ATGGCTTTGACGATGAGAGCGGCGGCGGCGGCTCCCCGGGGTTTGCGCCGCTTTTTCTGTTCGAACCCTATCCCTTCTTCTCCCACTTTCCCTTTCGCTTCAAATCCACCTTCCGGAGCTACATCCGCTCGACAGATGGCGGATCCCAACACCAACCTCTTCGTCTCTGGGCTTAGCAAACGTACAACAACGGAGAGACTGCGAGAAGAATTTCAAAAGTTTGGTGAAGTGGTTCACGCAAGGGTGGTAACTGATCGAGTCTCCGGTTACTCTAAGGGGTTTGGTTTTGTTCAATATGCCACTTTAGAAGATGCTGCTAAAGGCATTGAAGGCATGGATGGCAAGTTTTTGGATGGCTGGGTTATATTCGCAGAGTATGCAAGACCAAGACCCCCACCCGGAGAAGCTGTAAATAATATGACTAAACAAACTTATACCTCATATCTTTTCTATTCTTTCCCACCATTTCTTCCCTCACCGCATCTGTCTCCACAACTTTCGAACATGCCTCCTACTGTTATGAGCGAAGCTTGTGCACAGATGCCTGGGTTTTATAAGGACGGCTGTATGACACTGGTGAAAATATGA 588 0.4813 MALTMRAAAAAPRGLRRFFCSNPIPSSPTFPFASNPPSGATSARQMADPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGEAVNNMTKQTYTSYLFYSFPPFLPSPHLSPQLSNMPPTVMSEACAQMPGFYKDGCMTLVKI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01737 195 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 51 129 IPR000504 GO:0003723
Vifa6g01737 195 FunFam RNA recognition motif-containing protein 32 142 - -
Vifa6g01737 195 PANTHER NUCLEOLAR PROTEIN 8 36 135 - -
Vifa6g01737 195 Gene3D - 31 138 IPR012677 -
Vifa6g01737 195 SUPERFAMILY RNA-binding domain, RBD 35 139 IPR035979 GO:0003676
Vifa6g01737 195 SMART rrm1_1 52 125 IPR000504 GO:0003723
Vifa6g01737 195 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 53 119 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01737 Vifa-Chr6 650628413 650631461 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01737 28 131 Eukaryotic Initiation Factors Gene Family AT3G11400 32.692 3.37e-12 62.0