Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01708 ATGAACATCGCCATGGACTCGTATTGCTTCCACACTGTTGCATCTTTTCTTCTCCTCGCTTCTACCGCATCTTGCCTCTCATTTCCAAACCCTTCTCTCCTCGGCGTTCACCCTCTAGATGTGAAATACTATAGCTCCGAATTCATCAAATGCAAGGACGGATCAAAATCCTTCTCTAGAGACCGTCTCAATGACAATTTCTGTGACTGCCCTGATGGCACTGATGAACCTGGAACTTCCGCTTGTTCAGCTGGAAAGTTTTATTGCAGAAACCTAGGAAGCAAGCCACAGTTTATATTTTCTTCCCATGTTAATGATCGATTTTGCGATTGTTGTGACGGGAGTGATGAATACGATGGAATCGTTCGTTGTCCCAACACATGTGTCATGGGTGGAAACACAGAGAACATGTATGGCAATTATAATTCAAAGGTAAGCAATCTGGATCTTTTTGCTGAAAAAGAAACAGAACATGGAGTGAAGTCAGAGGAATCGGTTCATAGCCTTAATGGTTTGAAGCTGGCAGTTATTCTACAAGTGGTTCTAGTTGCTTTTTTGGTAATTCTATGGAGTTTCCGTTGCCACACCAGATATAGGAGGAGGCGTTCCCGCTGA 615 0.4341 MNIAMDSYCFHTVASFLLLASTASCLSFPNPSLLGVHPLDVKYYSSEFIKCKDGSKSFSRDRLNDNFCDCPDGTDEPGTSACSAGKFYCRNLGSKPQFIFSSHVNDRFCDCCDGSDEYDGIVRCPNTCVMGGNTENMYGNYNSKVSNLDLFAEKETEHGVKSEESVHSLNGLKLAVILQVVLVAFLVILWSFRCHTRYRRRRSR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01708 204 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 16 166 IPR039794 -
Vifa6g01708 204 Pfam Glucosidase II beta subunit-like 31 132 IPR028146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01708 Vifa-Chr6 639671102 639672219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01708 24 173 Calmodulin-binding Proteins AT5G56360 52.941 5.56e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01708 - - tpra:123907740 302.753