Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01699 ATGAGGAGCAACGAAGGAAAGATAGTTGGAGTTGAAGGAGGACACATAGTTCGATCCTCCGGTAAGAAAGATAGTCACAGCAAGGTTTACACATCGAAAGGACCTCGCGATCGCAGGGTTCGTCTCTCAGCACACACAGCCATTGAATTCTACGATGTTCAAGATCGTCTTGGCTATGACAGACCAAGTAGAGCAGTGGATTGGCTCATCACAAAAGCAAAACCTTCCATTGATAAGCTCGCCGAGCTTCCTTCGTGGCATCCACTCGGCAAAACTCAAACCCTAAACCTTCAAGAGGAAGAACAGAATGTAGCTGCACTCTCAACTGGCATGGTTATGGGAGAATCATCAAATGGTTATAGTTTTCATCTGCTAAATCAATTGCGTGAGGATCAAGATAACCCTAGTTCAGGTTTCATCGATCCTATACCTTTCTTTCCAACTACCTCTTCTACTTCTTCATCCATTAATTTTCAAAACTACCCTTCTGAAAACCTTGGGCTCTCTCTTCATTCCTTCCAAGATCACAATGGTTTCATTCCTTGGCAATCACAACAACCATGTGAAAACGAAAACGAAAACGAAAACCATAACCAAACACTTTTTGATAACCAGTATCATGTGAATTGGGACAATGAAACAACCAATGATTATATAAAGAAAGTAGGGTTCATGGTAAACTCAAATCCTTTTCTAGGTCAAGGTTCAGATTACAATCCAAATGAGACACTTGAGTCGAATCTTTCGCATTCGGCTTTGTCTTGGAATGAAATTCCTATGGATTCTTCTTCAGAGGTTCATCACAGATCACAACAAGTTCATCATCAAGCTTCTATCTTTGGAGGCTGCAGGTTTGTTTCTGATGGATTACCAGGTTTCTGCATTCTTGATACAGTTCAAAATGGAGAAGAGGGTCATGGAGTTTCTTCTAATAAGCCTTCTTCTGTTTCTCCTAACAACAACTGA 966 0.4099 MRSNEGKIVGVEGGHIVRSSGKKDSHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSRAVDWLITKAKPSIDKLAELPSWHPLGKTQTLNLQEEEQNVAALSTGMVMGESSNGYSFHLLNQLREDQDNPSSGFIDPIPFFPTTSSTSSSINFQNYPSENLGLSLHSFQDHNGFIPWQSQQPCENENENENHNQTLFDNQYHVNWDNETTNDYIKKVGFMVNSNPFLGQGSDYNPNETLESNLSHSALSWNEIPMDSSSEVHHRSQQVHHQASIFGGCRFVSDGLPGFCILDTVQNGEEGHGVSSNKPSSVSPNNN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01699 321 MobiDBLite consensus disorder prediction 17 36 - -
Vifa6g01699 321 MobiDBLite consensus disorder prediction 1 36 - -
Vifa6g01699 321 Pfam TCP family transcription factor 21 137 IPR017887 -
Vifa6g01699 321 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 271 IPR005333 GO:0003700
Vifa6g01699 321 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01699 Vifa-Chr6 638368603 638369568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01699 6 180 TCP Transcription Factor Family AT2G31070 46.766 6.64e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vifa6g01699 TCP 3.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01699 - - gmx:100814907 275.789