Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01696 ATGCCAAAATCCGTCGCTAACTCTAACCCTTCTTTTACCGATGGCGTCGCCACCAAGGATATCCACATCGATCCTTTCACTTCTCTCTCTATCCGAATCTTTCTTCCTCACTCCGCTCTTTCTCCTCCCGAGCCTCATTTCAAACCTAACTCCAAACCTAAACAACAAGCTCCCGAACCTGGATCTGTACGGAGAAGTAGCTATGGTCCTCCGTTCAGGGAAGAGAAGCTCCGAGGGAGGAATAGTAACGCTGTTGAGGGTTTGAATTTGATGGGCGCTGGTGTTGAAACCGGTGCCGGTTTGTACCGTGGTTACTCGCCGGCGTTGGATAATCGGCGGAGGAAATTACCAGTTATGTTGCAGTTTCATGGTGGGGGGTGGGTTAGTGGTAGTAATGATTCGGTGGCGAACGATTTGTTTTGTCGACGGATCGCCAAGCTTTGTGATGTGATTGTCGTTGCGGTTGGGTATAGGTTGGCGCCGGAGAGTAGGTATCCGGCTGCGTTTGAGGATGGGTTGAAGGTGTTGAATTGGTTGGCCAAGCAGGCGAATTTGGCCGAGTGTAGTAAATCTATGGGGGTTGGTGGAGGAAGCCATGGTGGTGGTGGTGGTGGGGAGTTTAACAAGGATAATCATAGGCATATTGTTGATTCTTTTGGTGCTTCAGTGGTGGAGCCTTGGTTGGCTAGTCATGGAGATCCAACAAGTGGTTTGTTAACTTCATTTTGCTACTTTGAGAATAATTCTTTACCATTCAACAAATATGCATTTTTGACAACACATAATGCATTTGCCGTTGAAGGGGAACCATCTCACACAGGTGTGCCTAGATTTACAGTCAACAACCAAGAACACAGCATCACTCAACAGCTAAATAATGGAGTTCGTGCACTTATGTTAGATACATATGATTTTGATGGAGATGTATGGCTATGTCATTCGTTTAAAGGTCAATGTCATGATGTTACAACATTTGAACCGGCTATTGATACGTTGAAGGAAATTGAGGCATTTTTATCGGCGAATACAAATGAAATTGTGACAATTATATTGGAAGATTATGTTGAATCTCCAAATGGTTTGACAAAGGTTTTCAGTGATGCTGGTCTTAAGAAGTATTGGTTTCCATTGGCTAGCATGCCAAAAAATGGTGAAAATTGGCCACTAGTTAGTGATTTGGTTGCTAAAAACCAAAGGTATTCATGCTTCAATTTCCAGGCATGCTCTTTGTGGATGTCGTTTAGTGTATATGTAACTGGTGTGCTCTTTCAGACAGCTGCTTTTGTCTCCTTTTTGCTTATTTCTCATGGTTACTGTATAATGTGCGAGCACCTTTCTTTAAATGAACGCCGTTCAACTGCCGCACTTGCATGTGTCTTTTACTTGACTCTAGTTGGTTACAAGGCTTCTGTTCCATACTTCACAGTGCTTCTGCTTCTAAATTATTTTATTTCATTCTATGTAATATTCCACCATATATCCCAAAACCTACTAGTGTTGCGAGAACAGTTGAGCATTATTGAAAATGAGGATGTTCGAGCAATGCATGATGCTGTGTATAAAAAGTACATAATGTTCAAGTAA 1584 0.4268 MPKSVANSNPSFTDGVATKDIHIDPFTSLSIRIFLPHSALSPPEPHFKPNSKPKQQAPEPGSVRRSSYGPPFREEKLRGRNSNAVEGLNLMGAGVETGAGLYRGYSPALDNRRRKLPVMLQFHGGGWVSGSNDSVANDLFCRRIAKLCDVIVVAVGYRLAPESRYPAAFEDGLKVLNWLAKQANLAECSKSMGVGGGSHGGGGGGEFNKDNHRHIVDSFGASVVEPWLASHGDPTSGLLTSFCYFENNSLPFNKYAFLTTHNAFAVEGEPSHTGVPRFTVNNQEHSITQQLNNGVRALMLDTYDFDGDVWLCHSFKGQCHDVTTFEPAIDTLKEIEAFLSANTNEIVTIILEDYVESPNGLTKVFSDAGLKKYWFPLASMPKNGENWPLVSDLVAKNQRYSCFNFQACSLWMSFSVYVTGVLFQTAAFVSFLLISHGYCIMCEHLSLNERRSTAALACVFYLTLVGYKASVPYFTVLLLLNYFISFYVIFHHISQNLLVLREQLSIIENEDVRAMHDAVYKKYIMFK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01696 527 MobiDBLite consensus disorder prediction 40 80 - -
Vifa6g01696 527 SUPERFAMILY PLC-like phosphodiesterases 248 413 IPR017946 GO:0006629|GO:0008081
Vifa6g01696 527 PANTHER UNCHARACTERIZED 247 404 - -
Vifa6g01696 527 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 246 359 - -
Vifa6g01696 527 Gene3D alpha/beta hydrolase 1 204 IPR029058 -
Vifa6g01696 527 Gene3D Phosphatidylinositol (PI) phosphodiesterase 244 418 IPR017946 GO:0006629|GO:0008081
Vifa6g01696 527 Pfam alpha/beta hydrolase fold 119 201 IPR013094 GO:0016787
Vifa6g01696 527 SUPERFAMILY alpha/beta-Hydrolases 29 202 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01696 Vifa-Chr6 636179841 636182857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01696 3 239 Carbohydrate Esterase AT5G14310 57.983 1.52e-80 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01696 - - gmx:100775445 316.235