Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01685 ATGGCTAATCCAGTAACAAAACAAAAATTAATATCCATTTTTTTCATCTTAATCACTCTTTTCACATCACAAGCCCTAGGTGATTGTGAAAGCGAAAGCACAAACAGTTGCAACAACAAAGAAAAAGCTTTATCTCTTAAAATCATAGCAATATTTGCAATATTAGTAACTAGCATGATTGGAGTGTGTTTACCCTTGGTGTCACGTTCCGTCCCGGCTTTAAGCCCGGACGGAAATCTGTTTGTGATCGTGAAGTGTTTCGCGGCCGGTATTATTCTTGGAACTGGCTTCATGCACGTACTTCCTGATTCGTTTGATATGTTGTGGTCGGATTGCTTGGATGAGAAACCATGGCACGAGTTTCCGTTTTCGGGACTCGCGGCTATGTTCTCTGCGGTGGTTACAATGATGGTGGATTCTTTGGCTACTAGCTATTATAGTCAGAAGGGTAAGAAAGGTGTTATAATTCCAGCTGAAGGTGAAGGTGGAGAAGATCAAGAGATGGGTGCTGTCCATGCTGGTCACCATCACCATTATGAGGCAAAGACGGATAGCGACGAGTCAAAGCTTCTCCGTTATCGTGTAGTCGCCATGGTATTAGAGCTTGGAATAGTAGTTCATTCAGTGGTGATAGGACTTGCCATGGGATCTTCCAATAACACATGCTCCATAAAAGGTCTAGTTGCTGCACTTTGCTTCCATCAAATGTTCGAAGGCATGGGTCTTGGTGGTTGCATCCTGCAGGCGGAGTACAAGTTTGTAAAGAAGGCTATAATGGTGTTTTTCTTCTCAGTTACAACACCACTTGGAATTGCATTAGGAATTGCAATGTCTAGTAGTTACAAAGAGAACAGTCCAAAAGCATTAATAACTGTTGGATTGCTTAATGGATCATCAGCTGGTCTTTTAATCTATATGGCTTTGGTTGATCTTCTTGCTGCTGATTTCATGAGTAAGAGGATGCAGGGTAGTATTAAGCTTCAATTAAAATCTTATGTTGCTGTGTTTCTTGGTGCTGGTGGCATGTCTCTCATGGCTAAATGGGCTTAA 1050 0.4181 MANPVTKQKLISIFFILITLFTSQALGDCESESTNSCNNKEKALSLKIIAIFAILVTSMIGVCLPLVSRSVPALSPDGNLFVIVKCFAAGIILGTGFMHVLPDSFDMLWSDCLDEKPWHEFPFSGLAAMFSAVVTMMVDSLATSYYSQKGKKGVIIPAEGEGGEDQEMGAVHAGHHHHYEAKTDSDESKLLRYRVVAMVLELGIVVHSVVIGLAMGSSNNTCSIKGLVAALCFHQMFEGMGLGGCILQAEYKFVKKAIMVFFFSVTTPLGIALGIAMSSSYKENSPKALITVGLLNGSSAGLLIYMALVDLLAADFMSKRMQGSIKLQLKSYVAVFLGAGGMSLMAKWA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01685 349 Pfam ZIP Zinc transporter 45 346 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vifa6g01685 349 NCBIfam ZIP zinc/iron transport family 29 349 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vifa6g01685 349 PANTHER ZINC/IRON TRANSPORTER 43 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01685 Vifa-Chr6 631151577 631152934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01685 23 349 Inorganic Solute Cotransporters AT1G31260 63.501 1.81e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01685 K14709 - gmx:100795511 535.798