Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01658 ATGGCTGATGGACCGCAATATCCATCAGTTGCTCAGAAGCTAGGTGGACATTCTTATTTGGTGTCCAGGCTAAGCTCTAACTCTGGTTACAGGAATTATTCTACATCTGGTGCTTTTTCTGATGGAGGAGTGCATGCTTCTGGTTTGGCGATTGCGTCACCTCTATCGTCGTTTACTGTGCCTTCTCCTTCGGAGAAAGGGCCGTCTGCTTTTTTGTTAGATTTTCTGATGGGAGGAGTGTCTGCTGCTGTGTCGAAGACAGCTGCTGCTCCTATTGAACGGGTTAAATTGCTTATCCAAAACCAGGATGAAATGCTTAAGAGTGGCAGGTTGTCTGAGCCATATAAAGGAATTGGTGATTGTTTTGCTCGAACCATGAAGGATGAGGGTGTAATTGCTCTGTGGAGAGGAAATACTGCTAATGTTATCAGATACTTCCCTACTCAGGCTCTGAACTTTGCTTTTAAGGATTACTTCAAGAGGCTGTTCAATTTTAAAAAAGACAAAGATGGCTACTGGAAGTGGTTTGCTGGGAATTTAGGATCTGGTGGAGCTGCTGGGGCTTCCTCACTCGCATTTGTCTATTCTTTGGATTATGCTCGTACCCGTTTGGCAAATGACTCAAAGGCTGCTAAGAAGGGTGGTGAGAGGCAATTCAATGGAATGGTTGATGTTTACACTAAAACTCTAAAGTCTGATGGCATTGCCGGCCTTTATCGTGGATTCAACATCTCGTGTGTTGGAATTATTGTGTACCGTGGTCTTTACTTTGGAATGTATGATTCTCTGAAACCAGTTGTTTTGGTTGGTGATATGCAGGATAGTTTCTTTGCTAGTTTCCTTTTGGGATGGGCCATCACAATTGGTGCTGGTCTGGCTTCGTATCCCATTGACACCGTGCGTAGAAGGATGATGATGACATCTGGAGAAGCTGTGAAGTATAGGAGCTCTTTGCATGCATTCCAAACCATCGTTGCAAAAGAGGGCACTAAATCTCTTTTCAAAGGTGCTGGTGCAAACATATTACGTGCTGTTGCAGGGGCTGGTGTGCTTGCTGGTTATGACAAGCTGCAGCTGGTTTTGTTTGGAAAGAAATATGGTTCTGGCGGCGGCTAA 1116 0.4462 MADGPQYPSVAQKLGGHSYLVSRLSSNSGYRNYSTSGAFSDGGVHASGLAIASPLSSFTVPSPSEKGPSAFLLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKSGRLSEPYKGIGDCFARTMKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLGSGGAAGASSLAFVYSLDYARTRLANDSKAAKKGGERQFNGMVDVYTKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGDMQDSFFASFLLGWAITIGAGLASYPIDTVRRRMMMTSGEAVKYRSSLHAFQTIVAKEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLVLFGKKYGSGGG 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01658 371 Gene3D Mitochondrial carrier domain 72 367 IPR023395 -
Vifa6g01658 371 PRINTS Mitochondrial carrier protein signature 137 157 IPR002067 GO:0055085
Vifa6g01658 371 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085
Vifa6g01658 371 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Vifa6g01658 371 PRINTS Mitochondrial carrier protein signature 283 305 IPR002067 GO:0055085
Vifa6g01658 371 PRINTS Mitochondrial carrier protein signature 74 87 IPR002067 GO:0055085
Vifa6g01658 371 PRINTS Mitochondrial carrier protein signature 87 101 IPR002067 GO:0055085
Vifa6g01658 371 SUPERFAMILY Mitochondrial carrier 70 356 IPR023395 -
Vifa6g01658 371 PRINTS Adenine nucleotide translocator signature 115 136 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa6g01658 371 PRINTS Adenine nucleotide translocator signature 174 187 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa6g01658 371 PRINTS Adenine nucleotide translocator signature 148 160 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa6g01658 371 PRINTS Adenine nucleotide translocator signature 279 295 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa6g01658 371 PRINTS Adenine nucleotide translocator signature 71 83 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vifa6g01658 371 FunFam ADP,ATP carrier protein, mitochondrial 72 367 - -
Vifa6g01658 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 162 IPR018108 -
Vifa6g01658 371 Pfam Mitochondrial carrier protein 173 266 IPR018108 -
Vifa6g01658 371 Pfam Mitochondrial carrier protein 71 166 IPR018108 -
Vifa6g01658 371 Pfam Mitochondrial carrier protein 274 362 IPR018108 -
Vifa6g01658 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 278 360 IPR018108 -
Vifa6g01658 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 266 IPR018108 -
Vifa6g01658 371 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 66 370 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01658 Vifa-Chr6 605874725 605876626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01658 3 362 Antiporters AT4G28390 78.649 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01658 K05863 - gmx:100818408 645.966