Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01651 ATGATGAAAGAAAGTCCGAAGGGAAAATGCGGGTCTTCTTCTGATAAGTCCACGAAAGAGAAGGAGAAATATCTGGTGGATAAGATTCAGGGGATTTTCAGTAATCTTCAGTCTGCGAGAAAGGAAAGTAGGGCTAATGACATTGTGATATTCGAGGAGCAGATGCATCTGTTGCTTCGAGAGTGGAAGGCCGAACTGGAGTCTCCAGCGACTTCCTTAGCTGATGGGAGCCTTGGTTCGTTTACAGGGGATTTAGCCCAACTTTTGCAAGCAATTGAGGAGAAAGATGACGCTACGAGTCCATTAACAAACCCTGGCCAATTGAAGACGGATGCCCATCAAAATAACATTACTCATAACAATTATCCGTATTTTCAGGAGAAATGTTTTGATAATAACCAGCCACTAAATCATACTTTTGACGGCTCTGCTTCAACTATATTCAACAATGCTTTAAATAGCTCAGACATGGCTCAGTTGGATTTTCATCCATTCAGTTTAAATGAAGATATGAATCACAACACTGTAGGTCACAACTCTGATTTGATTGGTCAGTTTGACTTGTATCAGGACCACAACCTCGGGCACAACACAGAAATAAAAAACTCAGAGTCGGGTCAATTTAGTTTTGAAGAAGGCTTTGATTGTAGCCAATTTTTCGTAGATAACGACACCACACAATTTGGAGACAATCTTATACCTAACATTCTTCCAAATATCCGCCCTCCACCTTCTGCTTTTCTAGCCCCAAAATGTGCACTGTGGGACTGTTTCAGACCTGCTCAAGGGTTAGAACGGTGCCAGGACTACTGTAGTACTAATCACGAGCTTTTAGCAAATAGCGAGGGTCTCCCTGGCATGACTCCCATTTTGCGACCTGGTGGCATTGATATAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCAAAGACACTGGGAAAAGAAGTGGGCATCCCTAAGTGTGAAGGCGCAGCTTCAACAAAAGCCCCCTGGAATGCTTCAGAGTTCTTTGACCTTTCTTTTCTTGAGGGTGAAACTATTAGGGAGTGGCTGTTCTTTGACAAGCCTCGAAGGGCGTTTGACAGTGGAACTAGGAAACAGAGATCACTCCCTGATTACAGTGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACATGGAGGACACAAGAGATCCTATTACATGGACCCCCAGCCTCTTAGTTATCTCGAGTGGCATTTGTACGAGTACGAGATCAATAACCAGGACGGTTGTGCATTATACAGACTAGAGTTAAAGCTTGTAGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACTAAGGAATCTCTTAATGATTTACAAAACAAGATGGGAAAGCTAACAGCTGCCGTTCCGTCACCAGACAGTGGAAAATCTGTCAAGGGAAAATCTGAGGCCAAGTCTGAGAATAATGGCCTGCCTGAAAATTAA 1458 0.4314 MMKESPKGKCGSSSDKSTKEKEKYLVDKIQGIFSNLQSARKESRANDIVIFEEQMHLLLREWKAELESPATSLADGSLGSFTGDLAQLLQAIEEKDDATSPLTNPGQLKTDAHQNNITHNNYPYFQEKCFDNNQPLNHTFDGSASTIFNNALNSSDMAQLDFHPFSLNEDMNHNTVGHNSDLIGQFDLYQDHNLGHNTEIKNSESGQFSFEEGFDCSQFFVDNDTTQFGDNLIPNILPNIRPPPSAFLAPKCALWDCFRPAQGLERCQDYCSTNHELLANSEGLPGMTPILRPGGIDIKDGPLFAAVLAKTLGKEVGIPKCEGAASTKAPWNASEFFDLSFLEGETIREWLFFDKPRRAFDSGTRKQRSLPDYSGRGWHESRKQVMKEHGGHKRSYYMDPQPLSYLEWHLYEYEINNQDGCALYRLELKLVDKKKSPKGKVTKESLNDLQNKMGKLTAAVPSPDSGKSVKGKSEAKSENNGLPEN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01651 485 MobiDBLite consensus disorder prediction 1 21 - -
Vifa6g01651 485 MobiDBLite consensus disorder prediction 436 485 - -
Vifa6g01651 485 PANTHER TRANSCRIPTION FACTOR VOZ1 2 480 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01651 Vifa-Chr6 603724829 603727636 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01651 1 461 VOZ-9 Transcription Factor Family AT1G28520 50.538 5.85e-150 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vifa6g01651 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01651 - - psat:127101646 939.488