Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01643 ATGGCCACAGAAACCGAACAAAGATCTCTTGAACAAACCCCAACATGGGCTGTCTCAATTTGTTGCCTCTTTGTCCTTGTTATATCCTTGATCATTGAAGGAGGTCTCCACAAATTTACTGAGGTTCTGAAGAAACAGAAAAGAAAATCTATGGGGAAAGCTTTGGCTAAAACCAAAACAGAAATGATGAAATTTGGTTTTGTGTCATTTTTGCTGACAATATCGGAAGTGCCAATATCAAAAATCTGCATCAATAAGGATATGGCAAATTCGTTTTTGCCTTGTAAAGATTCTATGGAGAAGTTAGCAGTATCATCAGAATTAGATCAAACACCATCTACCAATGAGTTGGGAAACCAAGTCAACTATTGTGAAGCTAAGGGCATGGTTAGTCTGATTTCAGATGATGGAGTCCTACAGCTAAATGTCTTAATCTCAATTTTGGCAGTGTTTCATATCCTTTACTGCACATTAACCATGTGTCTTGGGATGGCAAAGATGAGAAGATGGAAAAAATGGGAGGAAGAGACACAAACACTAGAATATCAGATAGATAATGATTCAAGAAGATTCCGATATATAAGTCAAACATTAGGTGGCAAGCGTCATTTTAAATTCTGGAATAACTATTCTCCCTTGCTCTGGATAGTCTGTTTCACGCGACAGTTCTATAATTCAGTCTCAAAAGATGATTACTTTGCTCTTCGAAATGGGTTCATCGCAGCAAATATTTCTGAAGGCAGCAATTTCAATTTCAACTTCAAGAAATTTCTTTCGCGCACGTATGACGAGGATTTTGAAAAAATTGTTGGAATAAGGTTTTGGATCTGGCTTTTCTCAATATTTTTCATATTCCTTAGTGCACATGAGTTTTATAATTACTACTGGCTTCCATTTATTCCACTTGTGATTGCTCTACTTGCTGGAACTAAACTACAAGTGATAATAACAAAGATGCATCTAGATAGTTGCAAAGAAAGTTCTGTGATCAAAGGAACCATACTTGTAAAACCAAGTGATGAATATTTCTGGTTTCATCGACCCGAATGGCTTCTCCATTTGCTCCAAATCATCCTTATACAGAACTCCTTTCAACTTGCATTTTTCACATGGACTTGGTATGAGTTTGGTCCAAGGTCTTGCTTCAATAGAGAAATAGAGGACATTGCCATAAGGATTGTATTAGGTTTAGCTGTTCAGCTTCTTTGTGCTTATGTCACTCTTCCCCTTTACGCACTTGTCACTCAGATGGGGTCTAGCATGAGAAAGGAGATTTTCAATGAGCATGTGACTCAAGGTCTAAAAAATTGGCATAAAAAGGCAAAGTTATCACTTTCGAAAAACAGTAACCCGACTTCTTTACATTCAAAAACAAGTGAGAATTCAGTAAGGATGTCATTAGAGGAGTTCCAGAATAATGAAGACATTATAACACCTAATTCTGCTAGCAACTCTGTAAGTGGAGAAGAGGAAGAAGTGATTGTAGCTACTGTTGAGAAAGATATATCAAGTAAATCCACTTCGGAAGATAGTAAGATCATCACCAGAGGAATCTATGACGGTGAGATCTCGTTTGGAATCTATGTGGGAAGTAGTAGCAGAGGTATAGGGGAAATTGTTTCAATAGCTGAAGAAGAAGAAGAAGAATAG 1650 0.3721 MATETEQRSLEQTPTWAVSICCLFVLVISLIIEGGLHKFTEVLKKQKRKSMGKALAKTKTEMMKFGFVSFLLTISEVPISKICINKDMANSFLPCKDSMEKLAVSSELDQTPSTNELGNQVNYCEAKGMVSLISDDGVLQLNVLISILAVFHILYCTLTMCLGMAKMRRWKKWEEETQTLEYQIDNDSRRFRYISQTLGGKRHFKFWNNYSPLLWIVCFTRQFYNSVSKDDYFALRNGFIAANISEGSNFNFNFKKFLSRTYDEDFEKIVGIRFWIWLFSIFFIFLSAHEFYNYYWLPFIPLVIALLAGTKLQVIITKMHLDSCKESSVIKGTILVKPSDEYFWFHRPEWLLHLLQIILIQNSFQLAFFTWTWYEFGPRSCFNREIEDIAIRIVLGLAVQLLCAYVTLPLYALVTQMGSSMRKEIFNEHVTQGLKNWHKKAKLSLSKNSNPTSLHSKTSENSVRMSLEEFQNNEDIITPNSASNSVSGEEEEVIVATVEKDISSKSTSEDSKIITRGIYDGEISFGIYVGSSSRGIGEIVSIAEEEEEE 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01643 549 Pfam Mlo family 7 460 IPR004326 GO:0006952|GO:0016020
Vifa6g01643 549 PANTHER MLO-LIKE PROTEIN 1 6 485 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01643 Vifa-Chr6 602382592 602387643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01643 6 442 MLO family AT2G39200 44.690 6.52e-149 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01643 K08472 - gmx:100789563 763.837