Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01610 ATGGCTGGAATTTTGAAACAACCAGGTCCATTCGCAATAACTCCACACAAAGTATCCCTCTGCATACTCTTCAAGAATCTACGCTCCTCCAACTCTTCCCCTAACACCATTACCGGATTTTCCTCCTTGAAGAGCGGTGACCAGGAAGCTCTCACGAAGTTATTTGCTGGAAAGGACAAGTCTGAAAAGGCTGGTGAAGCAACGGAAGACATACAAAACGAAAAGCAAGATACTGAAGAAAGTGGTTCAAAGAAAAGAAAATTATCCACGTCTGAGGTTAATATCACCTTTTCCGTTTCTGATGTCAAGAGTCCTAATGCTTGGTCCCTCATGTATCCCTTAATTCCTGATAAGCTGCAAACCTTATACAACGATGGCTACAAACTGGTTCCTATTGATGCTATGTTCCAGAAGGACGAAATGATTGACCTCATTGGAGTGACAAAGAGCAATAGGGTTTTCTACAACCCAATTCTGTGA 480 0.4229 MAGILKQPGPFAITPHKVSLCILFKNLRSSNSSPNTITGFSSLKSGDQEALTKLFAGKDKSEKAGEATEDIQNEKQDTEESGSKKRKLSTSEVNITFSVSDVKSPNAWSLMYPLIPDKLQTLYNDGYKLVPIDAMFQKDEMIDLIGVTKSNRVFYNPIL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01610 159 PANTHER BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASE 95 130 - -
Vifa6g01610 159 MobiDBLite consensus disorder prediction 54 90 - -
Vifa6g01610 159 MobiDBLite consensus disorder prediction 54 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01610 Vifa-Chr6 594320743 594321590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01610 53 151 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 32.000 2.05e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01610 K08073 - mtr:25496488 110.923