Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01607 ATGGACTCCATCTCCGGAGTTCCGTCTCCCCTCAACACCGCCCCACCGCGACCTCCGTCGACATCGCCGTTTCCCGGCCGGGATGACTGCTGGAGCGAAGACGCTACTTTCACTCTCATCGACGCATGGGGTGAACGCTACTTAGACCTAAACCGTGGTAACCTCCGCCAGAAGCACTGGCAAGAGGTTGCCGACGCCGTCAACGACCTCCACGCCGCCGGTAACAACAACAGGAAAGCTCGTCGGACCGACGTTCAGTGCAAAAACCGAATCGACACGCTTAAAAAGAAGTATAAGATCGAGAAAGCTAGGGTTTCCGAATCCGACAGCGGTTACCAGAGTCCTTGGCCATTCTTCTCCAGCCTCGACATCCTCATCGGAAACACTTTTCCGGTAAAGAAACACTCGCCGCCGGCCAGCGAACGAACCACCAACGCCGTCGTGAAATCTCTGCCGCCTCTTCCGGCGTGGATAATCTCTCATCCGGTTGGTCCCCGATCAGGGACGCAAAAACGTCCGGCGCAGATGAACAGAGACGACACATCTTTCCGACGGAATTTCTCAGCCTTTGCAACTGCGGCAGCGGCAGTGGCCGAGGCAGAAAGTGAGGAGATTGAGGACTGGAAGTCGAATTGCCGAACAAAGAGTGGGAAGAGGGGAAGAGAGAGTGATAGCAATATGGAGTGTGGGTACAAACATCTTGCTCAGGCGATAGAGAGGTTTGGTGAAGTATACGAAAGAGTTGAAGTCTCCAAACAGAGACAAATGGTGGAATTGGAAATGCAGAGGATGAAATTTGCAAAGGAGTTAGAGTTCCAAAGGATGCAGTTAATCATGGAAACGCAGATTCAGATTCAGAAAATCAAGCGCAGCAAGCGTTGTTCTCCTGGTGTTGACAGTTTCTCATAG 909 0.5259 MDSISGVPSPLNTAPPRPPSTSPFPGRDDCWSEDATFTLIDAWGERYLDLNRGNLRQKHWQEVADAVNDLHAAGNNNRKARRTDVQCKNRIDTLKKKYKIEKARVSESDSGYQSPWPFFSSLDILIGNTFPVKKHSPPASERTTNAVVKSLPPLPAWIISHPVGPRSGTQKRPAQMNRDDTSFRRNFSAFATAAAAVAEAESEEIEDWKSNCRTKSGKRGRESDSNMECGYKHLAQAIERFGEVYERVEVSKQRQMVELEMQRMKFAKELEFQRMQLIMETQIQIQKIKRSKRCSPGVDSFS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01607 302 MobiDBLite consensus disorder prediction 1 29 - -
Vifa6g01607 302 FunFam trihelix transcription factor ASIL2 31 100 - -
Vifa6g01607 302 Gene3D - 31 100 - -
Vifa6g01607 302 Pfam Myb/SANT-like DNA-binding domain 29 123 IPR044822 -
Vifa6g01607 302 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 16 292 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01607 Vifa-Chr6 593875587 593877803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01607 26 290 Trihelix Transcription Factor Family AT3G14180 34.328 4.35e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vifa6g01607 Myb_DNA-bind_4 2.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01607 - - lang:109355153 375.555