Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01570 ATGGGTAACAAACCATATTCTTTTGGTCATCCAGGAGTTGATCTTGTTGCAGCCAACTATCTCCAACAAGAGAATATAAATATACCAAATGATTCTCAAGGAAACGCCTTTTTTGATGTTTTGAATATAGAAAACTTGAATCAAGAGCTTACTGAGGTATTAGTCCAAATTCAAGAAAGTGAAAAACAAGCTGAGAAACATGATGAGATTTTGAAGAAAAATGATCTGAAAAAACTCTCTGAACTTTCAGAATTGAAAGATTCATATAAACAATTTCAAAATTTGGTGAAGTTACGTCTTAGTGATCTTGAAATATCAAAATATTTGATGCTTCTTGCTAAAGATCCTGTGGTAGGAGTAAAGGCAAAACTTACAAGAAAGAAACGAAGAAAAATTAATTCTTTATAG 408 0.3113 MGNKPYSFGHPGVDLVAANYLQQENINIPNDSQGNAFFDVLNIENLNQELTEVLVQIQESEKQAEKHDEILKKNDLKKLSELSELKDSYKQFQNLVKLRLSDLEISKYLMLLAKDPVVGVKAKLTRKKRRKINSL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01570 135 Coils Coil 43 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01570 Vifa-Chr6 567047417 567047971 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01570 2 74 Type I MADS-box Gene Family AT2G24840 29.333 6.39e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01570 - - mtr:11439559 143.28