Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01446 ATGATCACTACTAGTTTTGTTGTTACATTAGTGCTGCTATCCACAATATGTGATGCACAGTTGTCTTCTACATTTTACGACACTACATGCCCCGATGCACTAACCACCATTAGAACTGCCATTCGTACTGCTGTCTCTAAAGAGCGTCGCATGGCTGCATCTCTCATTCGCCTTCATTTTCATGACTGCTTTGTGCAAGGCTGTGATGCATCAATTTTGCTGAATGACAGTACCACAATCGAGAGCGAAAAGACTGCACTTCCAAATCTTAACTCAGTAAGGGGATTTCAAGTCATTGATAATGCAAAATCACAGGTAGAAAAAGTATGTCCAGGAGTTGTGTCTTGTGCAGACATAGTAGCTGTAGCAGCACGTGATGCATCATTCGCTGTAGGTGGTCCATCATGGACTGTCAAACTTGGACGAAGAGACTCTACTACAGCAAGTAAAACTTTGGCCAATACTCACCTTCCATTATTTACGGACGATCTTCAAACTCTTATATCTAAATTTACAATTAAAGATCTTACCGCCAAAGACATGGTTACTCTATCTGGTGCGCACACAATCGGACAAGCTCAATGCTTTACATTTCGTGATAGGATATACAACAATGCTAGTGACATAGATGCTGGATTCGCTAGCACTCGCCAACGTGGTTGTCCGTCTACCAGTTCCACTTCAAACAATCAAAAGTTAGCAGCACTGGACTTGGTTACACCAAATTCTTTTGACAACAACTACTTTAAGAATTTAATTCAAAAGAAGGGTCTTCTACAATCTGACCAAGTTCTTTTCAGCGGAGGATCTACGGATTCTATCGTTTCTCAATACAGCCAAAATCCTACAGCTTTCAAGTCTGATTTTGCTGCTGCTATGATCAAGATGGGAGATATTCAACCATTAACTGGATCTGCCGGAATCATAAGAAGTATTTGCAGTGCTCCCAACTAA 954 0.4119 MITTSFVVTLVLLSTICDAQLSSTFYDTTCPDALTTIRTAIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLNDSTTIESEKTALPNLNSVRGFQVIDNAKSQVEKVCPGVVSCADIVAVAARDASFAVGGPSWTVKLGRRDSTTASKTLANTHLPLFTDDLQTLISKFTIKDLTAKDMVTLSGAHTIGQAQCFTFRDRIYNNASDIDAGFASTRQRGCPSTSSTSNNQKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVSQYSQNPTAFKSDFAAAMIKMGDIQPLTGSAGIIRSICSAPN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01446 317 FunFam Peroxidase 24 166 - -
Vifa6g01446 317 SUPERFAMILY Heme-dependent peroxidases 20 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Vifa6g01446 317 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 ProSiteProfiles Plant heme peroxidase family profile. 20 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 CDD secretory_peroxidase 20 315 IPR033905 GO:0004601|GO:0042744
Vifa6g01446 317 FunFam Peroxidase 158 296 - -
Vifa6g01446 317 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 Pfam Peroxidase 38 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 Gene3D - 24 314 - -
Vifa6g01446 317 PANTHER PEROXIDASE 72-RELATED 15 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01446 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Vifa6g01446 317 Gene3D Peroxidase, domain 2 158 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01446 Vifa-Chr6 522872394 522873742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01446 6 317 Peroxidase AT1G14550 67.834 2.70e-158 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01446 K00430 - gmx:100811641 526.554