Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01445 ATGGCTTATAGAATGATCACTACTAGTTTTGTTGTTACATTAGTGCTGCTATCCACAATATGTGATGCACAGTTGTCTTCTACATTTTACGACACTACATGCCCCGATGCACTAACCACCATTAGAACTGCCATTCGTACTGCTGTCTCTAAAGAGCGTCGCATGGCTGCATCTCTCATTCGCCTTCATTTTCATGACTGCTTTGTGCAAGGCTGTGATGCATCAATTTTGCTGAATGACAGTACCACAATCGAGAGCGAAAAGACTGCACTTCCAAATCTTAACTCAGTAAGGGGATTTCAAGTCATTGATAATGCAAAATCACAGGTAGAAAAAGTATGTCCAGGAGTTGTGTCTTGTGCAGACATAGTAGCTGTAGCAGCACGTGATGCATCATTCGCTGTAAGTTTACAATTTGCATTGCATGCTTAA 432 0.4144 MAYRMITTSFVVTLVLLSTICDAQLSSTFYDTTCPDALTTIRTAIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLNDSTTIESEKTALPNLNSVRGFQVIDNAKSQVEKVCPGVVSCADIVAVAARDASFAVSLQFALHA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01445 143 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01445 143 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01445 143 Pfam Peroxidase 42 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01445 143 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Vifa6g01445 143 SUPERFAMILY Heme-dependent peroxidases 24 135 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa6g01445 143 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01445 143 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01445 143 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01445 143 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01445 143 Gene3D - 25 140 - -
Vifa6g01445 143 ProSiteProfiles Plant heme peroxidase family profile. 24 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01445 143 FunFam Peroxidase 28 141 - -
Vifa6g01445 143 PANTHER PEROXIDASE 72-RELATED 19 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01445 Vifa-Chr6 522857701 522858132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01445 11 132 Peroxidase AT1G14550 71.311 1.56e-63 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01445 K00430 - gmx:100811641 212.231