Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01441 ATGGCTTATAGAATGATCACTACTAGTTTTGTTGTTACATTAGTGCTGCTATCCACAATATGTGATGCACAGTTGTCTTCTACATTTTACGACACTACATGCCCCGATGCACTAACCACCATTAGAACTGCCATTCGTACTGCTGTCTCTAAAGAGCGTCGCATGGCTGCATCTCTCATTCGCCTTCATTTTCATGACTGCTTTGTGCAAGGCTGTGATGCATCAATTTTGCTGAATGACAGTACCACAATCGAGAGCGAAAAGACTGCACTTCCAAATCTTAACTCAGTAAGGGGATTTCAAGTCATTGATAATGCAAAATCACAGGTAGAAAAAGTATGTCCAGGAGTTGTGTCTTGTGCAGACATAGTAGCTGTAGCAGCACGTGATGCATCATTCGCTGTAGGTGGTCCATCATGGACTGTCAAACTTGGACGAAGAGACTCTACTACAGCAAGTAAAACTTTGGCCAATACTCACCTTCCATTATTTACGGACGATCTTCAAACTCTTATATCTAAATTTACAATTAAAGATCTTACCGCCAAAGACATGGTTACTCTATCTGGTGCGCACACAATCGGACAAGCTCAATGCTTTACATTTCGTGATAGGATATACAACAATGCTAGTGACATAGATGCTGGATTCGCTAGCACTCGCCAACGTGGTTGTCCGTCTACCAGTTCCACTTCAAACAATCAAAACGGAGGATCTACGGATTCTATCGTTTCTCAATACAGCCAAAATCCTACAGCTTTCAAGTCTGATTTTGCTGCTGCTATGATCAAGATGGGAGATATTCAACCATTAACTGGATCTGCCGGAATCATAAGAAGTATTTGCAGTGCTCCCAACTAA 861 0.4181 MAYRMITTSFVVTLVLLSTICDAQLSSTFYDTTCPDALTTIRTAIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLNDSTTIESEKTALPNLNSVRGFQVIDNAKSQVEKVCPGVVSCADIVAVAARDASFAVGGPSWTVKLGRRDSTTASKTLANTHLPLFTDDLQTLISKFTIKDLTAKDMVTLSGAHTIGQAQCFTFRDRIYNNASDIDAGFASTRQRGCPSTSSTSNNQNGGSTDSIVSQYSQNPTAFKSDFAAAMIKMGDIQPLTGSAGIIRSICSAPN 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01441 286 Gene3D Peroxidase, domain 2 237 265 - -
Vifa6g01441 286 Pfam Peroxidase 42 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Vifa6g01441 286 CDD secretory_peroxidase 24 284 IPR033905 GO:0004601|GO:0042744
Vifa6g01441 286 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Vifa6g01441 286 Gene3D - 266 286 - -
Vifa6g01441 286 MobiDBLite consensus disorder prediction 218 245 - -
Vifa6g01441 286 PANTHER PEROXIDASE 72-RELATED 235 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 SUPERFAMILY Heme-dependent peroxidases 24 286 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 Gene3D Peroxidase, domain 2 162 234 - -
Vifa6g01441 286 Gene3D - 28 161 - -
Vifa6g01441 286 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 ProSiteProfiles Plant heme peroxidase family profile. 24 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01441 286 FunFam Peroxidase 28 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01441 Vifa-Chr6 522786161 522787521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01441 11 286 Peroxidase AT1G14550 59.355 5.82e-130 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01441 K00430 - gmx:100811641 441.81