Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01440 ATGGCTTATAGAATGATCACTACTAGTTTTGTTGTTACATTAGTGCTGCTATCCACAATATGTGATGCACAGTTGTCTTCTACATTTTACGACACTACATGCCCCGATGCACTAACCACCATTAGAACTGCCATTCGTACTGCTGTCTCTAAAGAGCGTCGCATGGCTGCATCTCTCATTCGCCTTCATTTTCATGACTGCTTTGTGCAAGGCTGTGATGCATCAATTTTGCTGAATGACAGTACCACAATCGAGAGCGAAAAGACTGCACTTCCAAATCTTAACTCAGTAAGGGGATTTCAAGTCATTGATAATGCAAAATCACAGGTAGAAAAAGTATGTCCAGGAGTTGTGTCTTGTGCAGACATAGTAGCTGTAGCAGCACGTGATGCATCATTCGCTGTAGGTGGTCCATCATGGACTGTCAAACTTGGACGAAGAGACTCTACTACAGCAAGTAAAACTTTGGCCAATACTCACCTTCCATTATTTACGGACGATCTTCAAACTCTTATATCTAAATTTACAATTAAAGATCTTACCGCCAAAGACATGGTTACTCTATCTGGTGCGCACACAATCGGACAAGCTCAATGCTTTACATTTCGTGATAGGATATACAACAATGCTAGTGACATAGATGCTGGATTCGCTAGCACTCGCCAACGTGTGCTGCTATCCACAATATGTGATGCACAGTTGTCTTCTACATTTTACGACACTACATGCCCCGATGCACTAACCACCATTAGAACTGCCATTCGTACTGCTGTCTCTAAAGAGCGTCGCATGGCTGCATCTCTCATTCGCCTTCATTTTCATGACTGCTTTGTGCAAGGCTGTGATGCATCAATTTTGCTGAATGACAGTACCACAATCGAGAGCGAAAAGACTGCACTTCCAAATCTTAACTCAGTAAGGGGATTTCAAGTCATTGATAATGCAAAATCACAGGTAGAAAAAGTATGTCCAGGAGTTGTGTCTTGTGCAGACATAGTAGCTGTAGCAGCACGTGATGCATCATTCGCTGTAAGTTTACAATTTGCATTGCATGCTTAA 1059 0.4221 MAYRMITTSFVVTLVLLSTICDAQLSSTFYDTTCPDALTTIRTAIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLNDSTTIESEKTALPNLNSVRGFQVIDNAKSQVEKVCPGVVSCADIVAVAARDASFAVGGPSWTVKLGRRDSTTASKTLANTHLPLFTDDLQTLISKFTIKDLTAKDMVTLSGAHTIGQAQCFTFRDRIYNNASDIDAGFASTRQRVLLSTICDAQLSSTFYDTTCPDALTTIRTAIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLNDSTTIESEKTALPNLNSVRGFQVIDNAKSQVEKVCPGVVSCADIVAVAARDASFAVSLQFALHA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01440 352 SUPERFAMILY Heme-dependent peroxidases 24 224 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 Gene3D - 234 349 - -
Vifa6g01440 352 Gene3D - 25 178 - -
Vifa6g01440 352 FunFam Peroxidase 28 170 - -
Vifa6g01440 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Vifa6g01440 352 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Vifa6g01440 352 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 ProSitePatterns Peroxidases active site signature. 265 276 IPR019794 GO:0004601
Vifa6g01440 352 PANTHER PEROXIDASE 72-RELATED 19 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 SUPERFAMILY Heme-dependent peroxidases 233 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 ProSiteProfiles Plant heme peroxidase family profile. 24 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 Pfam Peroxidase 251 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 Pfam Peroxidase 42 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa6g01440 352 CDD secretory_peroxidase 24 224 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01440 Vifa-Chr6 522770734 522779342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01440 224 341 Peroxidase AT1G14550 72.881 3.23e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01440 K00430 - gmx:100811641 363.229