Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01434 ATGCATTTTCACATTCCTTATCTCTCAAACACCATGACCAATCTCAACCTCTCATCATCATCATCCTCCTCCTCCTCCTCGGCTTTCGCCGCCGACTTCAACATCAACATGATCTATTCCCTTACTCTCTTCATCTTCCAAAACATCCAAACTCTTGAAATTCTCATTGCAATTACCATCTTCATAATCATTCATTCTCTCAAACAAAAAACCCTTCATGGCTTACCTATTTGGCCTTTTCTTGGCATGTTACCTTCTTTACTCAATGGCCTAAGAACCAACTTGTATGAATGGTTCTCTGACATACTTAACAAACAAAACGGAACTTTTCATTTCAAAGGTCCTACTTTCAGCAGCCTCGACTGCATAATCACTTCCGATCCTCGAAACCTCGAACACCTTCTCAAAACCAAGTTCAACAACTTTCCTAAAGGAACTTACTTCAGAAGCACGTTAAGAGATTTACTTGGAGATGGTATATTCAACGCCGACGACGAAATATGGCAGAAGCAAAGGAAAACAGCAAGCATTGAGTTTCATTCAACAAAGTTCAGGAATTTAACAACTGATTCTTTGTTTCAGCTTGTTCATTCAAGGCTTTTACCTGTTCTAGAGGATTCAGTTGATAAAAGAGTTGTTATAGATCTTCAAGAGATTCTTTTAAAGTTAACTTTTGATAATGTTTGTATGATAGCTTTTGGTGTTGATCCAGGTTGTTTGAGTCAAAAACTTGTTGTTATACCATTTGCAAAAGCCTTTGAAGATGCAACAGAAGCAACCATGTTTCGTTTCGTTACGCCGACATGTGTTTGGAAGTTCATGAGGCTTTTCAACTTAGGCACAGAGAGAAAACTCAAGAAATCAATCAAAGGGGTTGATGAATTTGCTATGAATGTTATTAGGACTAGAAAAAAGGAACTGTCTTTGGAATTTGAGGACAAGAAATCACAGAAATCTGATCTGTTAACTGTTTTTATGAAGATGAAAGATGAGTTTGGAAGTGCTTATTCAGATAAGTTCTTGAGGGATATATGTGTGAATTTTATATTAGCCGGGAGAGACACTTCTTCTGTTGCTTTGAGTTGGTTTTTCTGGTTGCTTGATAAGAATCATGAAGTGGAGGAAAAGATTTTAGAAGAGATATGCAAAGTGGTGAGTCAAAGGAATGATATGAAGAATGAAAAGTTTGGAAATTCTTTGATGTTTAGGCCTGAAGAGATTAAAAAAATGGATTATTTGCATGCTTGTTTATCAGAAACTCTCAGATTATACCCTTCTGTTCCAGTGGATCACAAAGAGGTAGTTGAGGATGATACATTTCCAGATGGAACAGAACTAAAAAAAGGAACAAAAGTGATATATGCAATATATGCAATGGGAAGAATGGAAAGCATATGGGGAAAGGATTGCAGAGAGTTTAAGCCAGAAAGATGGTTAAAAGATGGAAAGTTTATGAGTGAATCTGCATACAAATTCACTGCATTTAATGGTGGACCTCGTTTGTGTTTAGGCAAAGATTTTGCATATTATCAAATGAAATATGTTGCTGCTAGTATCATATATAGATATCATGTGAAGGTTGTTGAAAATCACATTGTTGAGCCAAAGATTGCATTGACTATGTATATGAAACATGGAATCAAAGTTAATCTTTGTAAGAGGGATGATGCTGAAATTGGAAAATACTTGGATTTGGTCATTGGTGAATATTGA 1713 0.3608 MHFHIPYLSNTMTNLNLSSSSSSSSSSAFAADFNINMIYSLTLFIFQNIQTLEILIAITIFIIIHSLKQKTLHGLPIWPFLGMLPSLLNGLRTNLYEWFSDILNKQNGTFHFKGPTFSSLDCIITSDPRNLEHLLKTKFNNFPKGTYFRSTLRDLLGDGIFNADDEIWQKQRKTASIEFHSTKFRNLTTDSLFQLVHSRLLPVLEDSVDKRVVIDLQEILLKLTFDNVCMIAFGVDPGCLSQKLVVIPFAKAFEDATEATMFRFVTPTCVWKFMRLFNLGTERKLKKSIKGVDEFAMNVIRTRKKELSLEFEDKKSQKSDLLTVFMKMKDEFGSAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDKNHEVEEKILEEICKVVSQRNDMKNEKFGNSLMFRPEEIKKMDYLHACLSETLRLYPSVPVDHKEVVEDDTFPDGTELKKGTKVIYAIYAMGRMESIWGKDCREFKPERWLKDGKFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIYRYHVKVVENHIVEPKIALTMYMKHGIKVNLCKRDDAEIGKYLDLVIGEY 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01434 570 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 495 504 IPR017972 GO:0005506|GO:0016705
Vifa6g01434 570 PRINTS E-class P450 group I signature 360 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01434 570 PRINTS E-class P450 group I signature 502 525 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01434 570 PRINTS E-class P450 group I signature 340 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01434 570 PRINTS E-class P450 group I signature 414 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01434 570 PRINTS E-class P450 group I signature 492 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01434 570 CDD CYP86A 110 546 - -
Vifa6g01434 570 PANTHER CYTOCHROME P450 64 548 - -
Vifa6g01434 570 SUPERFAMILY Cytochrome P450 74 554 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01434 570 FunFam Cytochrome P450 66 557 - -
Vifa6g01434 570 PRINTS P450 superfamily signature 502 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01434 570 PRINTS P450 superfamily signature 351 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01434 570 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01434 570 PRINTS P450 superfamily signature 493 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01434 570 Pfam Cytochrome P450 74 538 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g01434 570 Gene3D Cytochrome P450 62 562 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01434 Vifa-Chr6 521492027 521494094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01434 38 562 Cytochrome P450 AT5G23190 73.384 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01434 K15402 - gmx:100809503 860.136